RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-221	ENST00000593639	BIN2	Q9UBW5	565 aa	Predicted RBP	11.69	□□□□□ -0.54
SRRM1-221	ENST00000593639	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.69	□□□□□ -0.54
SRRM1-221	ENST00000593639	ECM29	Q5VYK3	1845 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639		A0A1W2PPC1	479 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	UBXN2A	P68543	259 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	HDLBP	Q00341	1268 aa	Known RBP	11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	FBXO33	Q7Z6M2	555 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	TEKT1	Q969V4	418 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	ZDHHC15	Q96MV8	337 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	STAP2	Q9UGK3	403 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	GABRQ	Q9UN88	632 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	KCNH4	Q9UQ05	1017 aa		11.68	□□□□□ -0.54
SRRM1-221	ENST00000593639	GRM8	O00222	908 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	EVI5	O60447	810 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	SGPL1	O95470	568 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	CYP2C8	P10632	490 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	BCR	P11274	1271 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	FCGRT	P55899	365 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	FKBP1C	Q5VVH2	108 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	DCAF15	Q66K64	600 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	SLAIN1	Q8ND83	568 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	ZNF341	Q9BYN7	854 aa		11.67	□□□□□ -0.54
SRRM1-221	ENST00000593639	GPAT2	Q6NUI2	795 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	WWC1	Q8IX03	1113 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	TBC1D22A	Q8WUA7	517 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	HOOK2	Q96ED9	719 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	PARK7	Q99497	189 aa	Known RBP	11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	TMOD2	Q9NZR1	351 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	ZNF112	Q9UJU3	913 aa		11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.66	□□□□□ -0.54
SRRM1-221	ENST00000593639	INHA	P05111	366 aa		11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	ELN	P15502	786 aa		11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	MNX1	P50219	401 aa	Predicted RBP	11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	VPS37D	Q86XT2	251 aa		11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	DEFB118	Q96PH6	123 aa		11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	MRI	Q9BWK5	157 aa		11.65	□□□□□ -0.54
SRRM1-221	ENST00000593639	ARAP2	Q8WZ64	1704 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	ADCY3	O60266	1144 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	VAMP4	O75379	141 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	FRAT2	O75474	233 aa	Predicted RBP	11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	TFRC	P02786	760 aa	Known RBP	11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	FLT3LG	P49771	235 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	CCDC27	Q2M243	656 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	KAZALD1	Q96I82	304 aa		11.64	□□□□□ -0.55
SRRM1-221	ENST00000593639	MROH5	Q6ZUA9	1318 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	FANCI	Q9NVI1	1328 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	BCAM	P50895	628 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	TCP10	Q12799	353 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	NFIA	Q12857	509 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	LRRC24	Q50LG9	513 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	CAVIN4	Q5BKX8	364 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	NOL9	Q5SY16	702 aa	Known RBP	11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639		Q7L0L9	218 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	DIS3L	Q8TF46	1054 aa	Known RBP	11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	FAM151A	Q8WW52	585 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	SUCLG2	Q96I99	432 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	PAWR	Q96IZ0	340 aa	Known RBP	11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	GDF15	Q99988	308 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	CRISPLD2	Q9H0B8	497 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	PAK6	Q9NQU5	681 aa	Predicted RBP	11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639		A0A1B0GUL6	1792 aa		11.63	□□□□□ -0.55
SRRM1-221	ENST00000593639	IL16	Q14005	1332 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	CXCL11	O14625	94 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	IRF5	Q13568	498 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	METTL24	Q5JXM2	366 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	HHIPL2	Q6UWX4	724 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	DEFB123	Q8N688	67 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	VGLL2	Q8N8G2	317 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	PXYLP1	Q8TE99	480 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	SUGT1	Q9Y2Z0	365 aa		11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.62	□□□□□ -0.55
SRRM1-221	ENST00000593639	MAST3	O60307	1309 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639		A0A0G2JLL6	359 aa	Predicted RBP	11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	BMP8B	P34820	402 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	GPR153	Q6NV75	609 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	CDC42EP5	Q6NZY7	148 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	ZFPM1	Q8IX07	1006 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	FAM198A	Q9UFP1	575 aa		11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	LAMA2	P24043	3122 aa	Known RBP	11.61	□□□□□ -0.55
SRRM1-221	ENST00000593639	ATRNL1	Q5VV63	1379 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	PHF20L1	A8MW92	1017 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	TNPO2	O14787	897 aa	Known RBP	11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	ALDH1L1	O75891	902 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	PDE8B	O95263	885 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	EXOSC9	Q06265	439 aa	Known RBP	11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	DIXDC1	Q155Q3	683 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	NECAB2	Q7Z6G3	386 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	C7orf61	Q8IZ16	206 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	BICC1	Q9H694	974 aa	Known RBP	11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	TAOK2	Q9UL54	1235 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	STXBP5L	Q9Y2K9	1186 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	DAGLA	Q9Y4D2	1042 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	ZHX2	Q9Y6X8	837 aa		11.6	□□□□□ -0.55
SRRM1-221	ENST00000593639	CAPN2	P17655	700 aa		11.59	□□□□□ -0.55
SRRM1-221	ENST00000593639	LRIT3	Q3SXY7	679 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms