RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MIGA2Q7L4E1 593 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 AK9Q5TCS8 1911 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 INPP5BP32019 993 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 HOOK2Q96ED9 719 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 ZNF333Q96JL9 665 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 ZNF341Q9BYN7 854 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 ARHGAP39Q9C0H5 1083 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 DOCK2Q92608 1830 aa20.43■□□□□ 0.86
LIG1-205ENST00000593425 TLR2O60603 784 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
LIG1-205ENST00000593425 TCP10Q12799 353 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 NFIAQ12857 509 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 SNAPC2Q13487 334 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 CDC42EP5Q6NZY7 148 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 FAM151AQ8WW52 585 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 PCDH10Q9P2E7 1040 aa20.42■□□□□ 0.86
LIG1-205ENST00000593425 BRCA2P51587 3418 aa20.41■□□□□ 0.86
LIG1-205ENST00000593425 CIAO1O76071 339 aa20.41■□□□□ 0.86
LIG1-205ENST00000593425 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
LIG1-205ENST00000593425 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
LIG1-205ENST00000593425 ZCCHC17Q9NP64 241 aaKnown RBP20.41■□□□□ 0.86
LIG1-205ENST00000593425 MKI67P46013 3256 aaKnown RBP20.4■□□□□ 0.86
LIG1-205ENST00000593425 PHKA1P46020 1223 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 PPATQ06203 517 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 ARHGEF6Q15052 776 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.4■□□□□ 0.86
LIG1-205ENST00000593425 FAM198AQ9UFP1 575 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 ZNF112Q9UJU3 913 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 FBXO3Q9UK99 471 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 MYH2Q9UKX2 1941 aa20.4■□□□□ 0.86
LIG1-205ENST00000593425 NOB1Q9ULX3 412 aaKnown RBP20.4■□□□□ 0.86
LIG1-205ENST00000593425 PA2G4Q9UQ80 394 aaKnown RBP20.4■□□□□ 0.86
LIG1-205ENST00000593425 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
LIG1-205ENST00000593425 LDHBP07195 334 aaKnown RBP20.39■□□□□ 0.85
LIG1-205ENST00000593425 LACTBP83111 547 aaPredicted RBP20.39■□□□□ 0.85
LIG1-205ENST00000593425 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
LIG1-205ENST00000593425 LRRFIP2Q9Y608 721 aaKnown RBP20.39■□□□□ 0.85
LIG1-205ENST00000593425 KIAA0100Q14667 2235 aaKnown RBP20.38■□□□□ 0.85
LIG1-205ENST00000593425 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
LIG1-205ENST00000593425 ECM2O94769 699 aaPredicted RBP20.38■□□□□ 0.85
LIG1-205ENST00000593425 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
LIG1-205ENST00000593425 MYCP01106 439 aaPredicted RBP20.37■□□□□ 0.85
LIG1-205ENST00000593425 CTGFP29279 349 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 ADORA1P30542 326 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 ZFPM1Q8IX07 1006 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 SH3TC2Q8TF17 1288 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 MEIS3Q99687 375 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 USP40Q9NVE5 1235 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 GNL3LQ9NVN8 582 aaKnown RBP20.37■□□□□ 0.85
LIG1-205ENST00000593425 CPA4Q9UI42 421 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 DENND2AQ9ULE3 1009 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 KCNH4Q9UQ05 1017 aa20.37■□□□□ 0.85
LIG1-205ENST00000593425 ATRNL1Q5VV63 1379 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 ADGRA2Q96PE1 1338 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 IL15P40933 162 aaPredicted RBP20.36■□□□□ 0.85
LIG1-205ENST00000593425 MOGSQ13724 837 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 KIF22Q14807 665 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 NOL9Q5SY16 702 aaKnown RBP20.36■□□□□ 0.85
LIG1-205ENST00000593425 C17orf99Q6UX52 265 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 ANKRD23Q86SG2 305 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 GCC1Q96CN9 775 aa20.36■□□□□ 0.85
LIG1-205ENST00000593425 RFX7Q2KHR2 1363 aa20.35■□□□□ 0.85
LIG1-205ENST00000593425 PDHXO00330 501 aa20.35■□□□□ 0.85
LIG1-205ENST00000593425 SEMA3EO15041 775 aa20.35■□□□□ 0.85
LIG1-205ENST00000593425 CCDC102BQ68D86 513 aa20.35■□□□□ 0.85
LIG1-205ENST00000593425 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
LIG1-205ENST00000593425 COPRSQ9NQ92 184 aa20.35■□□□□ 0.85
LIG1-205ENST00000593425 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
LIG1-205ENST00000593425 SLC4A8Q2Y0W8 1093 aa20.34■□□□□ 0.85
LIG1-205ENST00000593425 GAKO14976 1311 aa20.33■□□□□ 0.85
LIG1-205ENST00000593425 DOCK1Q14185 1865 aa20.33■□□□□ 0.85
LIG1-205ENST00000593425 RGS3P49796 1198 aa20.33■□□□□ 0.85
LIG1-205ENST00000593425 PTPRFP10586 1907 aa20.33■□□□□ 0.84
LIG1-205ENST00000593425 MGAMO43451 1857 aa20.33■□□□□ 0.84
LIG1-205ENST00000593425 PHIPQ8WWQ0 1821 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 ZBTB22O15209 634 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 GNRH1P01148 92 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 PSMC4P43686 418 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 RASGRF1Q13972 1273 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
LIG1-205ENST00000593425 SH3BP5LQ7L8J4 393 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 TRIM47Q96LD4 638 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 IDI2Q9BXS1 227 aa20.32■□□□□ 0.84
LIG1-205ENST00000593425 PHF20L1A8MW92 1017 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 PRMT2P55345 433 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 TIMM10P62072 90 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 GPAT2Q6NUI2 795 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
LIG1-205ENST00000593425 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 HDAC5Q9UQL6 1122 aa20.31■□□□□ 0.84
LIG1-205ENST00000593425 ENTPD3O75355 529 aa20.3■□□□□ 0.84
LIG1-205ENST00000593425 OSBPP22059 807 aa20.3■□□□□ 0.84
LIG1-205ENST00000593425 RARSP54136 660 aaKnown RBP20.3■□□□□ 0.84
LIG1-205ENST00000593425 MTFR1Q15390 333 aa20.3■□□□□ 0.84
LIG1-205ENST00000593425 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
LIG1-205ENST00000593425 SCYL3Q8IZE3 742 aa20.3■□□□□ 0.84
LIG1-205ENST00000593425 DDX4Q9NQI0 724 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms