RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 AKAP2Q9Y2D5 859 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 TRIM17Q9Y577 477 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 WRNIP1Q96S55 665 aa23.42■■□□□ 1.34
CCDC43-205ENST00000592333 ZNF341Q9BYN7 854 aa23.42■■□□□ 1.34
CCDC43-205ENST00000592333 ZFYVE28Q9HCC9 887 aa23.42■■□□□ 1.34
CCDC43-205ENST00000592333 DAGLAQ9Y4D2 1042 aa23.42■■□□□ 1.34
CCDC43-205ENST00000592333 TNRC18O15417 2968 aaPredicted RBP23.41■■□□□ 1.34
CCDC43-205ENST00000592333 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
CCDC43-205ENST00000592333 CETPP11597 493 aa23.41■■□□□ 1.34
CCDC43-205ENST00000592333 CCL15Q16663 113 aa23.41■■□□□ 1.34
CCDC43-205ENST00000592333 BRI3BPQ8WY22 251 aa23.41■■□□□ 1.34
CCDC43-205ENST00000592333 SNCAIPQ9Y6H5 919 aa23.41■■□□□ 1.34
CCDC43-205ENST00000592333 PRDX5P30044 214 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 PPATQ06203 517 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 PPIL2Q13356 520 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 CCDC102BQ68D86 513 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 CDC42EP5Q6NZY7 148 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 SLF2Q8IX21 1173 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
CCDC43-205ENST00000592333 SNAPC2Q13487 334 aa23.39■■□□□ 1.33
CCDC43-205ENST00000592333 ZNF112Q9UJU3 913 aa23.39■■□□□ 1.33
CCDC43-205ENST00000592333 PA2G4Q9UQ80 394 aaKnown RBP23.39■■□□□ 1.33
CCDC43-205ENST00000592333 PTPN22Q9Y2R2 807 aa23.39■■□□□ 1.33
CCDC43-205ENST00000592333 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
CCDC43-205ENST00000592333 PHKA1P46020 1223 aa23.38■■□□□ 1.33
CCDC43-205ENST00000592333 TAF1CQ15572 869 aaPredicted RBP23.38■■□□□ 1.33
CCDC43-205ENST00000592333 SPTY2D1Q68D10 685 aaPredicted RBP23.38■■□□□ 1.33
CCDC43-205ENST00000592333 ATF7IPQ6VMQ6 1270 aa23.38■■□□□ 1.33
CCDC43-205ENST00000592333 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
CCDC43-205ENST00000592333 FAM163AQ96GL9 167 aaPredicted RBP23.38■■□□□ 1.33
CCDC43-205ENST00000592333 EFCC1Q9HA90 598 aa23.38■■□□□ 1.33
CCDC43-205ENST00000592333 MVPQ14764 893 aaKnown RBP23.37■■□□□ 1.33
CCDC43-205ENST00000592333 DIXDC1Q155Q3 683 aa23.37■■□□□ 1.33
CCDC43-205ENST00000592333 IDI2Q9BXS1 227 aa23.37■■□□□ 1.33
CCDC43-205ENST00000592333 PDE4DIPQ5VU43 2346 aa23.37■■□□□ 1.33
CCDC43-205ENST00000592333 GAKO14976 1311 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 IRF6O14896 467 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 ENTPD3O75355 529 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 FAM43AQ8N2R8 423 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 CD99L2Q8TCZ2 262 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 ZKSCAN4Q969J2 545 aaPredicted RBP23.36■■□□□ 1.33
CCDC43-205ENST00000592333 USP40Q9NVE5 1235 aa23.36■■□□□ 1.33
CCDC43-205ENST00000592333 A0A1B0GUL7 405 aa23.35■■□□□ 1.33
CCDC43-205ENST00000592333 TLR2O60603 784 aa23.35■■□□□ 1.33
CCDC43-205ENST00000592333 GNAI2P04899 355 aa23.35■■□□□ 1.33
CCDC43-205ENST00000592333 TRIM27P14373 513 aa23.35■■□□□ 1.33
CCDC43-205ENST00000592333 NOL9Q5SY16 702 aaKnown RBP23.35■■□□□ 1.33
CCDC43-205ENST00000592333 GNRH1P01148 92 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 TIMM10P62072 90 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 RASGRF1Q13972 1273 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 MIGA2Q7L4E1 593 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 ARMC5Q96C12 935 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 FAM198AQ9UFP1 575 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 KCNH4Q9UQ05 1017 aa23.34■■□□□ 1.33
CCDC43-205ENST00000592333 MAP4K4O95819 1239 aaPredicted RBP23.33■■□□□ 1.33
CCDC43-205ENST00000592333 ADORA1P30542 326 aa23.33■■□□□ 1.33
CCDC43-205ENST00000592333 NFIAQ12857 509 aa23.33■■□□□ 1.33
CCDC43-205ENST00000592333 XAGE2Q96GT9 111 aa23.33■■□□□ 1.33
CCDC43-205ENST00000592333 TCP10Q12799 353 aa23.32■■□□□ 1.32
CCDC43-205ENST00000592333 TFCP2Q12800 502 aa23.32■■□□□ 1.32
CCDC43-205ENST00000592333 DZIP1Q86YF9 867 aaKnown RBP23.32■■□□□ 1.32
CCDC43-205ENST00000592333 BTBD19C9JJ37 291 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 NPM3O75607 178 aaKnown RBP23.31■■□□□ 1.32
CCDC43-205ENST00000592333 SLC34A2O95436 690 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 INPP5BP32019 993 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 MAP3K10Q02779 954 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 KIF22Q14807 665 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 PRPF38BQ5VTL8 546 aaKnown RBP23.31■■□□□ 1.32
CCDC43-205ENST00000592333 ANKRD23Q86SG2 305 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 HTTP42858 3142 aa23.31■■□□□ 1.32
CCDC43-205ENST00000592333 IGSF3O75054 1194 aa23.3■■□□□ 1.32
CCDC43-205ENST00000592333 PRMT2P55345 433 aa23.3■■□□□ 1.32
CCDC43-205ENST00000592333 NBPF11Q86T75 865 aa23.3■■□□□ 1.32
CCDC43-205ENST00000592333 ABCF2Q9UG63 623 aa23.3■■□□□ 1.32
CCDC43-205ENST00000592333 RFX7Q2KHR2 1363 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 CXCL11O14625 94 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 BCAR3O75815 825 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
CCDC43-205ENST00000592333 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 FRAT1Q92837 279 aaPredicted RBP23.29■■□□□ 1.32
CCDC43-205ENST00000592333 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
CCDC43-205ENST00000592333 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 RBBP6Q7Z6E9 1792 aaKnown RBP23.28■■□□□ 1.32
CCDC43-205ENST00000592333 GPR75-ASB3A0A0A6YYF3 556 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 LDHCP07864 332 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 RGS3P49796 1198 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 GSTO1P78417 241 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
CCDC43-205ENST00000592333 NEUROD6Q96NK8 337 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 MROH7-TTC4A0A0A0MT08 1334 aa23.28■■□□□ 1.32
CCDC43-205ENST00000592333 PHF20L1A8MW92 1017 aa23.27■■□□□ 1.32
CCDC43-205ENST00000592333 ARID4AP29374 1257 aaPredicted RBP23.27■■□□□ 1.32
CCDC43-205ENST00000592333 LACTBP83111 547 aaPredicted RBP23.27■■□□□ 1.32
CCDC43-205ENST00000592333 GPR108Q9NPR9 543 aa23.27■■□□□ 1.32
CCDC43-205ENST00000592333 AK9Q5TCS8 1911 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 UQCRFS1P1P0C7P4 283 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 GORABQ5T7V8 394 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 C17orf99Q6UX52 265 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 SCYL3Q8IZE3 742 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms