RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GAKO14976 1311 aa33.47■■■□□ 2.95
SMAD4-213ENST00000591914 HSP90AB4PQ58FF6 505 aa33.46■■■□□ 2.95
SMAD4-213ENST00000591914 CCDC158Q5M9N0 1113 aa33.46■■■□□ 2.95
SMAD4-213ENST00000591914 REM2Q8IYK8 340 aaPredicted RBP33.46■■■□□ 2.95
SMAD4-213ENST00000591914 EAF2Q96CJ1 260 aaPredicted RBP33.46■■■□□ 2.95
SMAD4-213ENST00000591914 DBNLQ9UJU6 430 aaKnown RBP33.46■■■□□ 2.95
SMAD4-213ENST00000591914 HMMRO75330 724 aa33.45■■■□□ 2.95
SMAD4-213ENST00000591914 IREB2P48200 963 aaKnown RBP33.45■■■□□ 2.95
SMAD4-213ENST00000591914 TTC39AQ5SRH9 613 aa33.45■■■□□ 2.95
SMAD4-213ENST00000591914 ERICH6Q7L0X2 663 aa33.45■■■□□ 2.95
SMAD4-213ENST00000591914 FAM163AQ96GL9 167 aaPredicted RBP33.45■■■□□ 2.95
SMAD4-213ENST00000591914 ZNF512BQ96KM6 892 aaPredicted RBP33.45■■■□□ 2.95
SMAD4-213ENST00000591914 YTHDC1Q96MU7 727 aaKnown RBP33.45■■■□□ 2.95
SMAD4-213ENST00000591914 RPAP1Q9BWH6 1393 aaPredicted RBP33.45■■■□□ 2.94
SMAD4-213ENST00000591914 SLF2Q8IX21 1173 aa33.44■■■□□ 2.94
SMAD4-213ENST00000591914 TLR7Q9NYK1 1049 aaKnown RBP33.44■■■□□ 2.94
SMAD4-213ENST00000591914 AKAP11Q9UKA4 1901 aa33.43■■■□□ 2.94
SMAD4-213ENST00000591914 MECOMQ03112 1051 aa33.43■■■□□ 2.94
SMAD4-213ENST00000591914 TBC1D9Q6ZT07 1266 aa33.43■■■□□ 2.94
SMAD4-213ENST00000591914 ZNF384Q8TF68 577 aa33.43■■■□□ 2.94
SMAD4-213ENST00000591914 CLMNQ96JQ2 1002 aa33.43■■■□□ 2.94
SMAD4-213ENST00000591914 OTOFQ9HC10 1997 aa33.42■■■□□ 2.94
SMAD4-213ENST00000591914 CCDC8Q9H0W5 538 aaPredicted RBP33.42■■■□□ 2.94
SMAD4-213ENST00000591914 USP40Q9NVE5 1235 aa33.42■■■□□ 2.94
SMAD4-213ENST00000591914 TSKSQ9UJT2 592 aa33.42■■■□□ 2.94
SMAD4-213ENST00000591914 SPRYD7Q5W111 196 aa33.41■■■□□ 2.94
SMAD4-213ENST00000591914 RHPN1Q8TCX5 695 aa33.41■■■□□ 2.94
SMAD4-213ENST00000591914 FAM151AQ8WW52 585 aa33.41■■■□□ 2.94
SMAD4-213ENST00000591914 SLC10A4Q96EP9 437 aa33.41■■■□□ 2.94
SMAD4-213ENST00000591914 SAGE1Q9NXZ1 904 aa33.41■■■□□ 2.94
SMAD4-213ENST00000591914 MROH7-TTC4A0A0A0MT08 1334 aa33.4■■■□□ 2.94
SMAD4-213ENST00000591914 NFIAQ12857 509 aa33.4■■■□□ 2.94
SMAD4-213ENST00000591914 ANKRD13AQ8IZ07 590 aa33.4■■■□□ 2.94
SMAD4-213ENST00000591914 NSUN4Q96CB9 384 aaKnown RBP33.39■■■□□ 2.94
SMAD4-213ENST00000591914 SNRKQ9NRH2 765 aa33.39■■■□□ 2.94
SMAD4-213ENST00000591914 HOOK2Q96ED9 719 aa33.38■■■□□ 2.93
SMAD4-213ENST00000591914 RNF186Q9NXI6 227 aa33.38■■■□□ 2.93
SMAD4-213ENST00000591914 FAM198AQ9UFP1 575 aa33.38■■■□□ 2.93
SMAD4-213ENST00000591914 RFX7Q2KHR2 1363 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 GSTO1P78417 241 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 MKRN3Q13064 507 aaKnown RBP33.37■■■□□ 2.93
SMAD4-213ENST00000591914 AACSQ86V21 672 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 TNS4Q8IZW8 715 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 KIF1BPQ96EK5 621 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 IDI2Q9BXS1 227 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 RAI14Q9P0K7 980 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 LAMB1P07942 1786 aa33.37■■■□□ 2.93
SMAD4-213ENST00000591914 GPR75-ASB3A0A0A6YYF3 556 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 ZBTB48P10074 688 aaPredicted RBP33.36■■■□□ 2.93
SMAD4-213ENST00000591914 BTDP43251 543 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 TM4SF4P48230 202 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 TCP10Q12799 353 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.36■■■□□ 2.93
SMAD4-213ENST00000591914 WNK4Q96J92 1243 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 IL1RAPL2Q9NP60 686 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 LRP2BPQ9P2M1 347 aa33.36■■■□□ 2.93
SMAD4-213ENST00000591914 RAB11FIP3O75154 756 aa33.35■■■□□ 2.93
SMAD4-213ENST00000591914 CYP2E1P05181 493 aaPredicted RBP33.35■■■□□ 2.93
SMAD4-213ENST00000591914 IFFO2Q5TF58 517 aa33.35■■■□□ 2.93
SMAD4-213ENST00000591914 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.35■■■□□ 2.93
SMAD4-213ENST00000591914 MAST2Q6P0Q8 1798 aa33.34■■■□□ 2.93
SMAD4-213ENST00000591914 TRPA1O75762 1119 aa33.34■■■□□ 2.93
SMAD4-213ENST00000591914 LDHCP07864 332 aa33.34■■■□□ 2.93
SMAD4-213ENST00000591914 ZAP70P43403 619 aa33.34■■■□□ 2.93
SMAD4-213ENST00000591914 RRP1P56182 461 aaKnown RBP33.34■■■□□ 2.93
SMAD4-213ENST00000591914 MAP3K9P80192 1104 aa33.33■■■□□ 2.93
SMAD4-213ENST00000591914 SREBF2Q12772 1141 aa33.33■■■□□ 2.93
SMAD4-213ENST00000591914 APBB1O00213 710 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 ENTPD3O75355 529 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 WDHD1O75717 1129 aaPredicted RBP33.32■■■□□ 2.92
SMAD4-213ENST00000591914 RGS3P49796 1198 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 RHBDL3P58872 404 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 VGLL4Q14135 290 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 DCAF15Q66K64 600 aa33.32■■■□□ 2.92
SMAD4-213ENST00000591914 CLASRPQ8N2M8 674 aaKnown RBP33.32■■■□□ 2.92
SMAD4-213ENST00000591914 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.32■■■□□ 2.92
SMAD4-213ENST00000591914 IGSF3O75054 1194 aa33.31■■■□□ 2.92
SMAD4-213ENST00000591914 ZFPM1Q8IX07 1006 aa33.31■■■□□ 2.92
SMAD4-213ENST00000591914 ELP3Q9H9T3 547 aa33.31■■■□□ 2.92
SMAD4-213ENST00000591914 GJA5P36382 358 aa33.3■■■□□ 2.92
SMAD4-213ENST00000591914 MYO5AQ9Y4I1 1855 aaKnown RBP33.29■■■□□ 2.92
SMAD4-213ENST00000591914 MANSC4A6NHS7 340 aaPredicted RBP33.29■■■□□ 2.92
SMAD4-213ENST00000591914 MAP4K4O95819 1239 aaPredicted RBP33.29■■■□□ 2.92
SMAD4-213ENST00000591914 WRNIP1Q96S55 665 aa33.29■■■□□ 2.92
SMAD4-213ENST00000591914 PIH1D3Q9NQM4 214 aaKnown RBP33.29■■■□□ 2.92
SMAD4-213ENST00000591914 CSADQ9Y600 493 aa33.29■■■□□ 2.92
SMAD4-213ENST00000591914 AK9Q5TCS8 1911 aa33.28■■■□□ 2.92
SMAD4-213ENST00000591914 INHBEP58166 350 aa33.28■■■□□ 2.92
SMAD4-213ENST00000591914 MIGA2Q7L4E1 593 aa33.28■■■□□ 2.92
SMAD4-213ENST00000591914 OPTNQ96CV9 577 aa33.28■■■□□ 2.92
SMAD4-213ENST00000591914 ZNF341Q9BYN7 854 aa33.28■■■□□ 2.92
SMAD4-213ENST00000591914 DDX4Q9NQI0 724 aaKnown RBP33.28■■■□□ 2.92
SMAD4-213ENST00000591914 NAA16Q6N069 864 aaPredicted RBP33.27■■■□□ 2.92
SMAD4-213ENST00000591914 DOCK2Q92608 1830 aa33.26■■■□□ 2.92
SMAD4-213ENST00000591914 ATRNL1Q5VV63 1379 aa33.26■■■□□ 2.92
SMAD4-213ENST00000591914 NPM3O75607 178 aaKnown RBP33.26■■■□□ 2.91
SMAD4-213ENST00000591914 SNCAIPQ9Y6H5 919 aa33.26■■■□□ 2.91
SMAD4-213ENST00000591914 CASP8AP2Q9UKL3 1982 aa33.25■■■□□ 2.91
SMAD4-213ENST00000591914 IFIT2P09913 472 aaKnown RBP33.25■■■□□ 2.91
SMAD4-213ENST00000591914 SH3BP5LQ7L8J4 393 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms