RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 SNAP23O00161 211 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 PDHXO00330 501 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 CASP7P55210 303 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 HDLBPQ00341 1268 aaKnown RBP12.9□□□□□ -0.34
SDF2-209ENST00000591903 PRKCZQ05513 592 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 FAM83AQ86UY5 434 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 TDRD7Q8NHU6 1098 aaKnown RBP12.9□□□□□ -0.34
SDF2-209ENST00000591903 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
SDF2-209ENST00000591903 RPAP1Q9BWH6 1393 aaPredicted RBP12.9□□□□□ -0.34
SDF2-209ENST00000591903 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
SDF2-209ENST00000591903 TFRCP02786 760 aaKnown RBP12.89□□□□□ -0.35
SDF2-209ENST00000591903 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
SDF2-209ENST00000591903 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
SDF2-209ENST00000591903 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
SDF2-209ENST00000591903 PXYLP1Q8TE99 480 aa12.89□□□□□ -0.35
SDF2-209ENST00000591903 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
SDF2-209ENST00000591903 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
SDF2-209ENST00000591903 GDF15Q99988 308 aa12.89□□□□□ -0.35
SDF2-209ENST00000591903 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
SDF2-209ENST00000591903 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
SDF2-209ENST00000591903 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
SDF2-209ENST00000591903 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
SDF2-209ENST00000591903 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
SDF2-209ENST00000591903 ADCY3O60266 1144 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 BCRP11274 1271 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 UBE4AQ14139 1066 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 LDHAL6AQ6ZMR3 332 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 NECAB2Q7Z6G3 386 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
SDF2-209ENST00000591903 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
SDF2-209ENST00000591903 INHAP05111 366 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 IRF5Q13568 498 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 ANKLE1Q8NAG6 615 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 MRIQ9BWK5 157 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
SDF2-209ENST00000591903 CNNM1Q9NRU3 951 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 MAST3O60307 1309 aa12.86□□□□□ -0.35
SDF2-209ENST00000591903 PLIN1O60240 522 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 FLT3LGP49771 235 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 FOXO4P98177 505 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
SDF2-209ENST00000591903 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
SDF2-209ENST00000591903 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 DEFB118Q96PH6 123 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 GABRQQ9UN88 632 aa12.85□□□□□ -0.35
SDF2-209ENST00000591903 PTPRFP10586 1907 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 CXCL11O14625 94 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 GYG1P46976 350 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 CACNB3P54284 484 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 MOGSQ13724 837 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
SDF2-209ENST00000591903 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
SDF2-209ENST00000591903 Q7L0L9 218 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 C7orf61Q8IZ16 206 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
SDF2-209ENST00000591903 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
SDF2-209ENST00000591903 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
SDF2-209ENST00000591903 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
SDF2-209ENST00000591903 TNPO2O14787 897 aaKnown RBP12.83□□□□□ -0.36
SDF2-209ENST00000591903 VAMP4O75379 141 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 INPP5BP32019 993 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 BCAMP50895 628 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 FLIIQ13045 1269 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 FKBP5Q13451 457 aaPredicted RBP12.83□□□□□ -0.36
SDF2-209ENST00000591903 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
SDF2-209ENST00000591903 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 SLC45A1Q9Y2W3 748 aa12.83□□□□□ -0.36
SDF2-209ENST00000591903 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
SDF2-209ENST00000591903 CYP2C8P10632 490 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 ELNP15502 786 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
SDF2-209ENST00000591903 HHIPL2Q6UWX4 724 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 MIGA2Q7L4E1 593 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 G2E3Q7L622 706 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 DOCK2Q92608 1830 aa12.82□□□□□ -0.36
SDF2-209ENST00000591903 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 FAM109BQ6ICB4 259 aaPredicted RBP12.81□□□□□ -0.36
SDF2-209ENST00000591903 APOBEC3HQ6NTF7 200 aaKnown RBP12.81□□□□□ -0.36
SDF2-209ENST00000591903 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 COA7Q96BR5 231 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 ZNF594Q96JF6 807 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms