RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 AOC2O75106 756 aa12.3□□□□□ -0.44
BRCA1-227ENST00000591849 MECOMQ03112 1051 aa12.3□□□□□ -0.44
BRCA1-227ENST00000591849 NOGQ13253 232 aa12.3□□□□□ -0.44
BRCA1-227ENST00000591849 NBPF12Q5TAG4 269 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-227ENST00000591849 ZNF512BQ96KM6 892 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-227ENST00000591849 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
BRCA1-227ENST00000591849 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
BRCA1-227ENST00000591849 AOX1Q06278 1338 aa12.3□□□□□ -0.44
BRCA1-227ENST00000591849 COL1A1P02452 1464 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-227ENST00000591849 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
BRCA1-227ENST00000591849 MAP2K2P36507 400 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 ZAP70P43403 619 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 IREB2P48200 963 aaKnown RBP12.29□□□□□ -0.44
BRCA1-227ENST00000591849 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-227ENST00000591849 CDC42EP5Q6NZY7 148 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
BRCA1-227ENST00000591849 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
BRCA1-227ENST00000591849 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
BRCA1-227ENST00000591849 BAG3O95817 575 aa12.28□□□□□ -0.44
BRCA1-227ENST00000591849 BTDP43251 543 aa12.28□□□□□ -0.44
BRCA1-227ENST00000591849 TCP10Q12799 353 aa12.28□□□□□ -0.44
BRCA1-227ENST00000591849 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
BRCA1-227ENST00000591849 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-227ENST00000591849 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-227ENST00000591849 CYP2E1P05181 493 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-227ENST00000591849 MAP3K12Q12852 859 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 FAM83AQ86UY5 434 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 FAM151AQ8WW52 585 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-227ENST00000591849 GPATCH3Q96I76 525 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
BRCA1-227ENST00000591849 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 MROH7-TTC4A0A0A0MT08 1334 aa12.27□□□□□ -0.45
BRCA1-227ENST00000591849 SLC10A3P09131 477 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 CYP7A1P22680 504 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 KIF23Q02241 960 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-227ENST00000591849 PICALMQ13492 652 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 AAMPQ13685 434 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 TTF1Q15361 905 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-227ENST00000591849 DCAF15Q66K64 600 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 NSUN4Q96CB9 384 aaKnown RBP12.26□□□□□ -0.45
BRCA1-227ENST00000591849 PIH1D3Q9NQM4 214 aaKnown RBP12.26□□□□□ -0.45
BRCA1-227ENST00000591849 GAKO14976 1311 aa12.26□□□□□ -0.45
BRCA1-227ENST00000591849 GPR75-ASB3A0A0A6YYF3 556 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 IGSF3O75054 1194 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-227ENST00000591849 MAP4K4O95819 1239 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-227ENST00000591849 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
BRCA1-227ENST00000591849 PLCG2P16885 1265 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 RGS3P49796 1198 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 LBX1P52954 281 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
BRCA1-227ENST00000591849 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 ANKRD13AQ8IZ07 590 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 BOLA2Q9H3K6 86 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 CSADQ9Y600 493 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 CASP8AP2Q9UKL3 1982 aa12.25□□□□□ -0.45
BRCA1-227ENST00000591849 UNCXA6NJT0 531 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 GOLIM4O00461 696 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 ENTPD3O75355 529 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 NFIAQ12857 509 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 LDLRAD1Q5T700 205 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 TEX11Q8IYF3 940 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-227ENST00000591849 TEPSINQ96N21 525 aa12.24□□□□□ -0.45
BRCA1-227ENST00000591849 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-227ENST00000591849 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-227ENST00000591849 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-227ENST00000591849 CA12O43570 354 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 MAGEB6Q8N7X4 407 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
BRCA1-227ENST00000591849 ZIC5Q96T25 663 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 IDI2Q9BXS1 227 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 ZNF341Q9BYN7 854 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 ANTXR1Q9H6X2 564 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
BRCA1-227ENST00000591849 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
BRCA1-227ENST00000591849 ATP5JP18859 108 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 SPRYD7Q5W111 196 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-227ENST00000591849 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-227ENST00000591849 ZNF384Q8TF68 577 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 GCC1Q96CN9 775 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 CLMNQ96JQ2 1002 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 WRNIP1Q96S55 665 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 CSRNP1Q96S65 589 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 TRIM34Q9BYJ4 488 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms