RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 XAGE2Q96GT9 111 aa16.7■□□□□ 0.26
LSM7-207ENST00000591745 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
LSM7-207ENST00000591745 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.263e-9■□□□□ 8.1
LSM7-207ENST00000591745 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
LSM7-207ENST00000591745 SZT2Q5T011 3432 aa16.7■□□□□ 0.26
LSM7-207ENST00000591745 ST18O60284 1047 aa16.69■□□□□ 0.26
LSM7-207ENST00000591745 ECE2O60344 883 aa16.69■□□□□ 0.26
LSM7-207ENST00000591745 UBE4AQ14139 1066 aa16.69■□□□□ 0.26
LSM7-207ENST00000591745 TSHZ3Q63HK5 1081 aa16.69■□□□□ 0.26
LSM7-207ENST00000591745 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
LSM7-207ENST00000591745 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
LSM7-207ENST00000591745 PUS3Q9BZE2 481 aaKnown RBP16.69■□□□□ 0.26
LSM7-207ENST00000591745 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
LSM7-207ENST00000591745 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
LSM7-207ENST00000591745 TIMM10P62072 90 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
LSM7-207ENST00000591745 GPSM2P81274 684 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
LSM7-207ENST00000591745 LAMB1P07942 1786 aa16.67■□□□□ 0.26
LSM7-207ENST00000591745 GPR25O00155 361 aa16.67■□□□□ 0.26
LSM7-207ENST00000591745 FGFR2P21802 821 aa16.67■□□□□ 0.26
LSM7-207ENST00000591745 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
LSM7-207ENST00000591745 ANGEL2Q5VTE6 544 aaKnown RBP16.67■□□□□ 0.26
LSM7-207ENST00000591745 PRAMEF18Q5VWM3 479 aa16.67■□□□□ 0.26
LSM7-207ENST00000591745 FBXO46Q6PJ61 603 aaPredicted RBP16.67■□□□□ 0.26
LSM7-207ENST00000591745 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
LSM7-207ENST00000591745 KIAA0100Q14667 2235 aaKnown RBP16.67■□□□□ 0.26
LSM7-207ENST00000591745 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
LSM7-207ENST00000591745 SEMA3EO15041 775 aa16.66■□□□□ 0.26
LSM7-207ENST00000591745 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
LSM7-207ENST00000591745 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
LSM7-207ENST00000591745 MKRN3Q13064 507 aaKnown RBP16.66■□□□□ 0.26
LSM7-207ENST00000591745 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
LSM7-207ENST00000591745 SULF1Q8IWU6 871 aa16.66■□□□□ 0.26
LSM7-207ENST00000591745 HMG20BQ9P0W2 317 aa16.66■□□□□ 0.26
LSM7-207ENST00000591745 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
LSM7-207ENST00000591745 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
LSM7-207ENST00000591745 HSPA4P34932 840 aa16.65■□□□□ 0.26
LSM7-207ENST00000591745 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
LSM7-207ENST00000591745 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
LSM7-207ENST00000591745 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
LSM7-207ENST00000591745 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
LSM7-207ENST00000591745 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
LSM7-207ENST00000591745 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
LSM7-207ENST00000591745 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
LSM7-207ENST00000591745 SCARF1Q14162 830 aa16.64■□□□□ 0.25
LSM7-207ENST00000591745 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
LSM7-207ENST00000591745 CHRNDQ07001 517 aa16.63■□□□□ 0.25
LSM7-207ENST00000591745 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
LSM7-207ENST00000591745 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
LSM7-207ENST00000591745 SSUH2Q9Y2M2 353 aa16.63■□□□□ 0.25
LSM7-207ENST00000591745 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
LSM7-207ENST00000591745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.63■□□□□ 0.25
LSM7-207ENST00000591745 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
LSM7-207ENST00000591745 MAP4K4O95819 1239 aaPredicted RBP16.62■□□□□ 0.25
LSM7-207ENST00000591745 TM4SF4P48230 202 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 ZNF280AP59817 542 aaPredicted RBP16.62■□□□□ 0.25
LSM7-207ENST00000591745 CAP1Q01518 475 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 KRT32Q14532 448 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 TM6SF1Q9BZW5 370 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
LSM7-207ENST00000591745 GOLIM4O00461 696 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 PSMA5P28066 241 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
LSM7-207ENST00000591745 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 KCNB2Q92953 911 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 GMLQ99445 158 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
LSM7-207ENST00000591745 MINPP1Q9UNW1 487 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 MED23Q9ULK4 1368 aa16.61■□□□□ 0.25
LSM7-207ENST00000591745 KCNJ4P48050 445 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 MAP3K12Q12852 859 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 NOM1Q5C9Z4 860 aaKnown RBP16.6■□□□□ 0.25
LSM7-207ENST00000591745 KIF2CQ99661 725 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
LSM7-207ENST00000591745 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 FKTNO75072 461 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 FKBP1BP68106 108 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
LSM7-207ENST00000591745 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 C15orf52Q6ZUT6 534 aaKnown RBP16.59■□□□□ 0.25
LSM7-207ENST00000591745 VPS37DQ86XT2 251 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 ZNF804BA4D1E1 1349 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 CEP290O15078 2479 aa16.59■□□□□ 0.25
LSM7-207ENST00000591745 WTIPA6NIX2 430 aaPredicted RBP16.58■□□□□ 0.24
LSM7-207ENST00000591745 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms