RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.32
VPS4B-207ENST00000591519 RASA3Q14644 834 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
VPS4B-207ENST00000591519 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
VPS4B-207ENST00000591519 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 AOX1Q06278 1338 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
VPS4B-207ENST00000591519 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 USP2O75604 605 aaPredicted RBP13.07□□□□□ -0.32
VPS4B-207ENST00000591519 HDLBPQ00341 1268 aaKnown RBP13.07□□□□□ -0.32
VPS4B-207ENST00000591519 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 ZNF70Q9UC06 446 aaPredicted RBP13.07□□□□□ -0.32
VPS4B-207ENST00000591519 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
VPS4B-207ENST00000591519 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
VPS4B-207ENST00000591519 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
VPS4B-207ENST00000591519 CAVIN4Q5BKX8 364 aa13.06□□□□□ -0.32
VPS4B-207ENST00000591519 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
VPS4B-207ENST00000591519 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
VPS4B-207ENST00000591519 TEPSINQ96N21 525 aa13.06□□□□□ -0.32
VPS4B-207ENST00000591519 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
VPS4B-207ENST00000591519 VEZTQ9HBM0 779 aa13.06□□□□□ -0.32
VPS4B-207ENST00000591519 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
VPS4B-207ENST00000591519 FGFR2P21802 821 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 CRKP46108 304 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
VPS4B-207ENST00000591519 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
VPS4B-207ENST00000591519 METTL24Q5JXM2 366 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 GPR153Q6NV75 609 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
VPS4B-207ENST00000591519 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
VPS4B-207ENST00000591519 FKTNO75072 461 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 GRIK5Q16478 980 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 SUGT1Q9Y2Z0 365 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 LAMB1P07942 1786 aa13.04□□□□□ -0.32
VPS4B-207ENST00000591519 EYA2O00167 538 aa13.03□□□□□ -0.32
VPS4B-207ENST00000591519 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
VPS4B-207ENST00000591519 BCAMP50895 628 aa13.03□□□□□ -0.32
VPS4B-207ENST00000591519 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
VPS4B-207ENST00000591519 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
VPS4B-207ENST00000591519 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
VPS4B-207ENST00000591519 ZDHHC15Q96MV8 337 aa13.03□□□□□ -0.32
VPS4B-207ENST00000591519 IGF2BP3O00425 579 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 GJA5P36382 358 aa13.02□□□□□ -0.33
VPS4B-207ENST00000591519 TNNI2P48788 182 aa13.02□□□□□ -0.33
VPS4B-207ENST00000591519 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
VPS4B-207ENST00000591519 OTUD7BQ6GQQ9 843 aa13.02□□□□□ -0.33
VPS4B-207ENST00000591519 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
VPS4B-207ENST00000591519 FRAT2O75474 233 aaPredicted RBP13.01□□□□□ -0.33
VPS4B-207ENST00000591519 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 HHIPL2Q6UWX4 724 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 LPIN2Q92539 896 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 TEKT1Q969V4 418 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 PTPN18Q99952 460 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
VPS4B-207ENST00000591519 MAST3O60307 1309 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 CIAO1O76071 339 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 SOX10P56693 466 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 CHAF1AQ13111 956 aaPredicted RBP13□□□□□ -0.33
VPS4B-207ENST00000591519 APOBEC3HQ6NTF7 200 aaKnown RBP13□□□□□ -0.33
VPS4B-207ENST00000591519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13□□□□□ -0.33
VPS4B-207ENST00000591519 TMEM39BQ9GZU3 492 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
VPS4B-207ENST00000591519 SLC5A1P13866 664 aa12.99□□□□□ -0.33
VPS4B-207ENST00000591519 WDR66Q8TBY9 1149 aa12.99□□□□□ -0.33
VPS4B-207ENST00000591519 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
VPS4B-207ENST00000591519 NOB1Q9ULX3 412 aaKnown RBP12.99□□□□□ -0.33
VPS4B-207ENST00000591519 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
VPS4B-207ENST00000591519 CRHR2Q13324 411 aa12.98□□□□□ -0.33
VPS4B-207ENST00000591519 ARHGAP45Q92619 1136 aa12.98□□□□□ -0.33
VPS4B-207ENST00000591519 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
VPS4B-207ENST00000591519 API5Q9BZZ5 524 aaKnown RBP12.98□□□□□ -0.33
VPS4B-207ENST00000591519 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
VPS4B-207ENST00000591519 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
VPS4B-207ENST00000591519 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
VPS4B-207ENST00000591519 GTF2A2P52657 109 aa12.97□□□□□ -0.33
VPS4B-207ENST00000591519 VGLL4Q14135 290 aa12.97□□□□□ -0.33
VPS4B-207ENST00000591519 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
VPS4B-207ENST00000591519 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
VPS4B-207ENST00000591519 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms