RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 MECOMQ03112 1051 aa26.3■■□□□ 1.8
LRP3-202ENST00000590275 FKBP1CQ5VVH2 108 aa26.29■■□□□ 1.8
LRP3-202ENST00000590275 FAM83AQ86UY5 434 aa26.29■■□□□ 1.8
LRP3-202ENST00000590275 RNF186Q9NXI6 227 aa26.29■■□□□ 1.8
LRP3-202ENST00000590275 PPP1R12BO60237 982 aaPredicted RBP26.28■■□□□ 1.8
LRP3-202ENST00000590275 IFFO2Q5TF58 517 aa26.28■■□□□ 1.8
LRP3-202ENST00000590275 SPRYD7Q5W111 196 aa26.28■■□□□ 1.8
LRP3-202ENST00000590275 RPAP2Q8IXW5 612 aaPredicted RBP26.28■■□□□ 1.8
LRP3-202ENST00000590275 BEGAINQ9BUH8 593 aa26.28■■□□□ 1.8
LRP3-202ENST00000590275 USP40Q9NVE5 1235 aa26.28■■□□□ 1.8
LRP3-202ENST00000590275 TNNI2P48788 182 aa26.27■■□□□ 1.8
LRP3-202ENST00000590275 TCP10Q12799 353 aa26.27■■□□□ 1.8
LRP3-202ENST00000590275 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.27■■□□□ 1.8
LRP3-202ENST00000590275 ZGPATQ8N5A5 531 aaKnown RBP26.27■■□□□ 1.8
LRP3-202ENST00000590275 NSUN4Q96CB9 384 aaKnown RBP26.27■■□□□ 1.8
LRP3-202ENST00000590275 FAM163AQ96GL9 167 aaPredicted RBP26.27■■□□□ 1.8
LRP3-202ENST00000590275 IL1RAPL2Q9NP60 686 aa26.27■■□□□ 1.8
LRP3-202ENST00000590275 RFX7Q2KHR2 1363 aa26.27■■□□□ 1.8
LRP3-202ENST00000590275 CYP2E1P05181 493 aaPredicted RBP26.26■■□□□ 1.79
LRP3-202ENST00000590275 UQCRFS1P1P0C7P4 283 aa26.26■■□□□ 1.79
LRP3-202ENST00000590275 TTC39AQ5SRH9 613 aa26.26■■□□□ 1.79
LRP3-202ENST00000590275 DZIP1Q86YF9 867 aaKnown RBP26.26■■□□□ 1.79
LRP3-202ENST00000590275 TNS4Q8IZW8 715 aa26.26■■□□□ 1.79
LRP3-202ENST00000590275 CNKSR2Q8WXI2 1034 aa26.26■■□□□ 1.79
LRP3-202ENST00000590275 NDUFB9Q9Y6M9 179 aa26.26■■□□□ 1.79
LRP3-202ENST00000590275 TRPA1O75762 1119 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 SLURP2P0DP57 97 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 ZAP70P43403 619 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 ERICH6Q7L0X2 663 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 RHPN1Q8TCX5 695 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 WNK4Q96J92 1243 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 DDX4Q9NQI0 724 aaKnown RBP26.25■■□□□ 1.79
LRP3-202ENST00000590275 TMOD2Q9NZR1 351 aa26.25■■□□□ 1.79
LRP3-202ENST00000590275 MROH7-TTC4A0A0A0MT08 1334 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 BTDP43251 543 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 RHBDL3P58872 404 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 SH3BP5LQ7L8J4 393 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.24■■□□□ 1.79
LRP3-202ENST00000590275 FAM151AQ8WW52 585 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 SLC10A4Q96EP9 437 aa26.24■■□□□ 1.79
LRP3-202ENST00000590275 ZNF512BQ96KM6 892 aaPredicted RBP26.24■■□□□ 1.79
LRP3-202ENST00000590275 PIH1D3Q9NQM4 214 aaKnown RBP26.24■■□□□ 1.79
LRP3-202ENST00000590275 APBB1O00213 710 aa26.23■■□□□ 1.79
LRP3-202ENST00000590275 CA12O43570 354 aa26.23■■□□□ 1.79
LRP3-202ENST00000590275 WDHD1O75717 1129 aaPredicted RBP26.23■■□□□ 1.79
LRP3-202ENST00000590275 IREB2P48200 963 aaKnown RBP26.23■■□□□ 1.79
LRP3-202ENST00000590275 TM4SF4P48230 202 aa26.23■■□□□ 1.79
LRP3-202ENST00000590275 SPTY2D1Q68D10 685 aaPredicted RBP26.23■■□□□ 1.79
LRP3-202ENST00000590275 ELP3Q9H9T3 547 aa26.23■■□□□ 1.79
LRP3-202ENST00000590275 RPAP1Q9BWH6 1393 aaPredicted RBP26.22■■□□□ 1.79
LRP3-202ENST00000590275 OTOFQ9HC10 1997 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 GPR75-ASB3A0A0A6YYF3 556 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 VGLL4Q14135 290 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 CCDC158Q5M9N0 1113 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 MIGA2Q7L4E1 593 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 AACSQ86V21 672 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 ANKRD13AQ8IZ07 590 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.22■■□□□ 1.79
LRP3-202ENST00000590275 AKAP11Q9UKA4 1901 aa26.22■■□□□ 1.79
LRP3-202ENST00000590275 ATRNL1Q5VV63 1379 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 RGS3P49796 1198 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 ADGRA1Q86SQ6 560 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 IDI2Q9BXS1 227 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 SAGE1Q9NXZ1 904 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 RAI14Q9P0K7 980 aa26.21■■□□□ 1.79
LRP3-202ENST00000590275 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
LRP3-202ENST00000590275 ERC1Q8IUD2 1116 aa26.2■■□□□ 1.78
LRP3-202ENST00000590275 MYH2Q9UKX2 1941 aa26.2■■□□□ 1.78
LRP3-202ENST00000590275 UNCXA6NJT0 531 aa26.19■■□□□ 1.78
LRP3-202ENST00000590275 MAP3K9P80192 1104 aa26.19■■□□□ 1.78
LRP3-202ENST00000590275 ZKSCAN4Q969J2 545 aaPredicted RBP26.19■■□□□ 1.78
LRP3-202ENST00000590275 ANTXR1Q9H6X2 564 aa26.19■■□□□ 1.78
LRP3-202ENST00000590275 LRP2BPQ9P2M1 347 aa26.19■■□□□ 1.78
LRP3-202ENST00000590275 SNCAIPQ9Y6H5 919 aa26.19■■□□□ 1.78
LRP3-202ENST00000590275 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
LRP3-202ENST00000590275 DDTLA6NHG4 134 aaPredicted RBP26.17■■□□□ 1.78
LRP3-202ENST00000590275 IGF2BP3O00425 579 aaKnown RBP eCLIP26.17■■□□□ 1.78
LRP3-202ENST00000590275 HMMRO75330 724 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 TBC1D8O95759 1140 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 INPP5BP32019 993 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 HSP90AB4PQ58FF6 505 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 REM2Q8IYK8 340 aaPredicted RBP26.17■■□□□ 1.78
LRP3-202ENST00000590275 KIF1BPQ96EK5 621 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 WRNIP1Q96S55 665 aa26.17■■□□□ 1.78
LRP3-202ENST00000590275 ZBTB48P10074 688 aaPredicted RBP26.16■■□□□ 1.78
LRP3-202ENST00000590275 MS4A4AQ96JQ5 239 aa26.16■■□□□ 1.78
LRP3-202ENST00000590275 PTPN18Q99952 460 aa26.16■■□□□ 1.78
LRP3-202ENST00000590275 PCDHB15Q9Y5E8 787 aa26.16■■□□□ 1.78
LRP3-202ENST00000590275 ENTPD3O75355 529 aa26.15■■□□□ 1.78
LRP3-202ENST00000590275 PICALMQ13492 652 aa26.15■■□□□ 1.78
LRP3-202ENST00000590275 SLF2Q8IX21 1173 aa26.15■■□□□ 1.78
LRP3-202ENST00000590275 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
LRP3-202ENST00000590275 ZNF112Q9UJU3 913 aa26.15■■□□□ 1.78
LRP3-202ENST00000590275 SMARCA5O60264 1052 aaPredicted RBP26.14■■□□□ 1.78
LRP3-202ENST00000590275 SH3RF3Q8TEJ3 882 aaPredicted RBP26.14■■□□□ 1.78
LRP3-202ENST00000590275 CHMP4BQ9H444 224 aaKnown RBP26.14■■□□□ 1.78
LRP3-202ENST00000590275 RAB11FIP3O75154 756 aa26.13■■□□□ 1.77
LRP3-202ENST00000590275 GSTO1P78417 241 aa26.13■■□□□ 1.77
LRP3-202ENST00000590275 NAA16Q6N069 864 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms