RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 NR5A1Q13285 461 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 DDB1Q16531 1140 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 NOM1Q5C9Z4 860 aaKnown RBP13.97□□□□□ -0.17
AP3D1-206ENST00000589223 ZNF771Q7L3S4 317 aaPredicted RBP13.97□□□□□ -0.17
AP3D1-206ENST00000589223 MARCH10Q8NA82 808 aaPredicted RBP13.97□□□□□ -0.17
AP3D1-206ENST00000589223 CFAP45Q9UL16 551 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
AP3D1-206ENST00000589223 NMT2O60551 498 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 STAMQ92783 540 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 SLC4A4Q9Y6R1 1079 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 JCADQ9P266 1359 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 SMC2O95347 1197 aa13.97□□□□□ -0.17
AP3D1-206ENST00000589223 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 GOLGA8AA7E2F4 631 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 BTBD18B2RXH4 712 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 CIAO1O76071 339 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
AP3D1-206ENST00000589223 ZNF75DP51815 510 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 PNOCQ13519 176 aa13.96□□□□□ -0.17
AP3D1-206ENST00000589223 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
AP3D1-206ENST00000589223 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 PDE8AO60658 829 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 TERF1P54274 439 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 SIK1P57059 783 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 ERFEQ4G0M1 354 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 VPS37DQ86XT2 251 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.18
AP3D1-206ENST00000589223 MYSM1Q5VVJ2 828 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 KRT40Q6A162 431 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 RIOK3O14730 519 aaKnown RBP13.95□□□□□ -0.18
AP3D1-206ENST00000589223 SPTLC2O15270 562 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
AP3D1-206ENST00000589223 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
AP3D1-206ENST00000589223 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 FBXO18Q8NFZ0 1043 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.182e-6■■□□□ 11.9
AP3D1-206ENST00000589223 TAF1P21675 1872 aa13.95□□□□□ -0.18
AP3D1-206ENST00000589223 CYP7A1P22680 504 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 CHRNDQ07001 517 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 USP49Q70CQ1 688 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 STRBPQ96SI9 672 aaKnown RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 HMGN5P82970 282 aaKnown RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 ZSCAN16Q9H4T2 348 aaPredicted RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 RCOR1Q9UKL0 485 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 ELP1O95163 1332 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 KIAA1524Q8TCG1 905 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
AP3D1-206ENST00000589223 CTNNA3Q9UI47 895 aa13.94□□□□□ -0.18
AP3D1-206ENST00000589223 SALL1Q9NSC2 1324 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 PFKFB1P16118 471 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 FAM47AQ5JRC9 791 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 ZBTB43O43298 467 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
AP3D1-206ENST00000589223 TJP1Q07157 1748 aa13.93□□□□□ -0.18
AP3D1-206ENST00000589223 ZNF202O95125 648 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 FAM160A1Q05DH4 1040 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 IQCB1Q15051 598 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 COL4A1P02462 1669 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 ADAMTS3O15072 1205 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 CYP2D6P10635 497 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 TPD52L1Q16890 204 aaPredicted RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 DHX40Q8IX18 779 aaKnown RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 UTP14AQ9BVJ6 771 aaKnown RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 IFNKQ9P0W0 207 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 GSG1L2A8MUP6 293 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 PAXIP1Q6ZW49 1069 aaPredicted RBP13.92□□□□□ -0.18
AP3D1-206ENST00000589223 TXNRD3Q86VQ6 643 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
AP3D1-206ENST00000589223 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 WNT7AO00755 349 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms