RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 REM2Q8IYK8 340 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-209ENST00000589214 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
ERCC1-209ENST00000589214 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
ERCC1-209ENST00000589214 NOP58Q9Y2X3 529 aaKnown RBP18.71■□□□□ 0.59
ERCC1-209ENST00000589214 LAMB1P07942 1786 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 MAST2Q6P0Q8 1798 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-209ENST00000589214 CDC42EP5Q6NZY7 148 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 FAM83AQ86UY5 434 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-209ENST00000589214 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 SPATA5Q8NB90 893 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 SLC10A4Q96EP9 437 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 WNK4Q96J92 1243 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 CHMP4BQ9H444 224 aaKnown RBP18.7■□□□□ 0.58
ERCC1-209ENST00000589214 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
ERCC1-209ENST00000589214 MCAMP43121 646 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 SREBF2Q12772 1141 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 SPTY2D1Q68D10 685 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-209ENST00000589214 CASP8AP2Q9UKL3 1982 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 GAKO14976 1311 aa18.69■□□□□ 0.58
ERCC1-209ENST00000589214 DOCK2Q92608 1830 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 APBB1O00213 710 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 TCP10Q12799 353 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 NFIAQ12857 509 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 ERICH6Q7L0X2 663 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 ELP3Q9H9T3 547 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 USP40Q9NVE5 1235 aa18.68■□□□□ 0.58
ERCC1-209ENST00000589214 TLR7Q9NYK1 1049 aaKnown RBP18.68■□□□□ 0.58
ERCC1-209ENST00000589214 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
ERCC1-209ENST00000589214 MECOMQ03112 1051 aa18.67■□□□□ 0.58
ERCC1-209ENST00000589214 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
ERCC1-209ENST00000589214 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
ERCC1-209ENST00000589214 MROH7-TTC4A0A0A0MT08 1334 aa18.67■□□□□ 0.58
ERCC1-209ENST00000589214 UNCXA6NJT0 531 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 HMMRO75330 724 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 GJA5P36382 358 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 BTDP43251 543 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 VGLL4Q14135 290 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.66■□□□□ 0.58
ERCC1-209ENST00000589214 FAM151AQ8WW52 585 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-209ENST00000589214 SNRKQ9NRH2 765 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
ERCC1-209ENST00000589214 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
ERCC1-209ENST00000589214 MANSC4A6NHS7 340 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-209ENST00000589214 TM4SF4P48230 202 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-209ENST00000589214 ERC1Q8IUD2 1116 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 ZNF384Q8TF68 577 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-209ENST00000589214 OPTNQ96CV9 577 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 HOOK2Q96ED9 719 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 RAI14Q9P0K7 980 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 FAM198AQ9UFP1 575 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 CSADQ9Y600 493 aa18.65■□□□□ 0.58
ERCC1-209ENST00000589214 RGS3P49796 1198 aa18.64■□□□□ 0.57
ERCC1-209ENST00000589214 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
ERCC1-209ENST00000589214 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
ERCC1-209ENST00000589214 LRP2BPQ9P2M1 347 aa18.64■□□□□ 0.57
ERCC1-209ENST00000589214 TBC1D8O95759 1140 aa18.63■□□□□ 0.57
ERCC1-209ENST00000589214 MIGA2Q7L4E1 593 aa18.63■□□□□ 0.57
ERCC1-209ENST00000589214 AACSQ86V21 672 aa18.63■□□□□ 0.57
ERCC1-209ENST00000589214 RHPN1Q8TCX5 695 aa18.63■□□□□ 0.57
ERCC1-209ENST00000589214 NSUN4Q96CB9 384 aaKnown RBP18.63■□□□□ 0.57
ERCC1-209ENST00000589214 GSTO1P78417 241 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 PICALMQ13492 652 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 HSP90AB4PQ58FF6 505 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 ZFPM1Q8IX07 1006 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 OTUD5Q96G74 571 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 FAM163AQ96GL9 167 aaPredicted RBP18.62■□□□□ 0.57
ERCC1-209ENST00000589214 IDI2Q9BXS1 227 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 ZNF341Q9BYN7 854 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
ERCC1-209ENST00000589214 PCDHB15Q9Y5E8 787 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
ERCC1-209ENST00000589214 MYO5AQ9Y4I1 1855 aaKnown RBP18.62■□□□□ 0.57
ERCC1-209ENST00000589214 IGF2BP3O00425 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
ERCC1-209ENST00000589214 WDHD1O75717 1129 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-209ENST00000589214 ZAP70P43403 619 aa18.61■□□□□ 0.57
ERCC1-209ENST00000589214 DGKZQ13574 1117 aa18.61■□□□□ 0.57
ERCC1-209ENST00000589214 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
ERCC1-209ENST00000589214 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-209ENST00000589214 ABHD8Q96I13 439 aa18.61■□□□□ 0.57
ERCC1-209ENST00000589214 ZNF512BQ96KM6 892 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-209ENST00000589214 DDX4Q9NQI0 724 aaKnown RBP18.61■□□□□ 0.57
ERCC1-209ENST00000589214 GPR75-ASB3A0A0A6YYF3 556 aa18.6■□□□□ 0.57
ERCC1-209ENST00000589214 ENTPD3O75355 529 aa18.6■□□□□ 0.57
ERCC1-209ENST00000589214 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms