RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 EAF2Q96CJ1 260 aaPredicted RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 TMEM39BQ9GZU3 492 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 DBNLQ9UJU6 430 aaKnown RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
TPM4-209ENST00000588483 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
TPM4-209ENST00000588483 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 FAM151AQ8WW52 585 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
TPM4-209ENST00000588483 MROH7-TTC4A0A0A0MT08 1334 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 MAP4K4O95819 1239 aaPredicted RBP12.88□□□□□ -0.35
TPM4-209ENST00000588483 TM4SF4P48230 202 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 LBX1P52954 281 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 CACNB3P54284 484 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 MECOMQ03112 1051 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
TPM4-209ENST00000588483 ANKRD13AQ8IZ07 590 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
TPM4-209ENST00000588483 RHPN1Q8TCX5 695 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 NSUN4Q96CB9 384 aaKnown RBP12.88□□□□□ -0.35
TPM4-209ENST00000588483 HOOK2Q96ED9 719 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 KIF1BPQ96EK5 621 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
TPM4-209ENST00000588483 RAB11FIP3O75154 756 aa12.87□□□□□ -0.35
TPM4-209ENST00000588483 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
TPM4-209ENST00000588483 NFIAQ12857 509 aa12.87□□□□□ -0.35
TPM4-209ENST00000588483 PRKG1Q13976 671 aa12.87□□□□□ -0.35
TPM4-209ENST00000588483 TTC39AQ5SRH9 613 aa12.87□□□□□ -0.35
TPM4-209ENST00000588483 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
TPM4-209ENST00000588483 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
TPM4-209ENST00000588483 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
TPM4-209ENST00000588483 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
TPM4-209ENST00000588483 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 ENTPD3O75355 529 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
TPM4-209ENST00000588483 LDHCP07864 332 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
TPM4-209ENST00000588483 RHBDL3P58872 404 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 GSTO1P78417 241 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
TPM4-209ENST00000588483 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 CLMNQ96JQ2 1002 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 RNF186Q9NXI6 227 aa12.86□□□□□ -0.35
TPM4-209ENST00000588483 MYO5AQ9Y4I1 1855 aaKnown RBP12.86□□□□□ -0.35
TPM4-209ENST00000588483 WDHD1O75717 1129 aaPredicted RBP12.85□□□□□ -0.35
TPM4-209ENST00000588483 BTDP43251 543 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 INHBEP58166 350 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 SREBF2Q12772 1141 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 AACSQ86V21 672 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
TPM4-209ENST00000588483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM4-209ENST00000588483 WNK4Q96J92 1243 aa12.85□□□□□ -0.35
TPM4-209ENST00000588483 CCDC8Q9H0W5 538 aaPredicted RBP12.85□□□□□ -0.35
TPM4-209ENST00000588483 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
TPM4-209ENST00000588483 ZAP70P43403 619 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 VGLL4Q14135 290 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
TPM4-209ENST00000588483 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
TPM4-209ENST00000588483 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
TPM4-209ENST00000588483 GJA5P36382 358 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 RGS3P49796 1198 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 PPP4CP60510 307 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 ZNF341Q9BYN7 854 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
TPM4-209ENST00000588483 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 AK9Q5TCS8 1911 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
TPM4-209ENST00000588483 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 TRPA1O75762 1119 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 ALDH1A1P00352 501 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
TPM4-209ENST00000588483 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
TPM4-209ENST00000588483 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
TPM4-209ENST00000588483 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms