RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 MIGA2Q7L4E1 593 aa21.04■□□□□ 0.96
TMED1-203ENST00000588259 EFCC1Q9HA90 598 aa21.04■□□□□ 0.96
TMED1-203ENST00000588259 ZFYVE28Q9HCC9 887 aa21.04■□□□□ 0.96
TMED1-203ENST00000588259 SNCAIPQ9Y6H5 919 aa21.04■□□□□ 0.96
TMED1-203ENST00000588259 RPAP1Q9BWH6 1393 aaPredicted RBP21.04■□□□□ 0.96
TMED1-203ENST00000588259 ADORA1P30542 326 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 CDC42EP5Q6NZY7 148 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 ERO1BQ86YB8 467 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 ZNF341Q9BYN7 854 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 DENND2AQ9ULE3 1009 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 MYH2Q9UKX2 1941 aa21.03■□□□□ 0.96
TMED1-203ENST00000588259 GNAI3P08754 354 aa21.02■□□□□ 0.96
TMED1-203ENST00000588259 CETPP11597 493 aa21.02■□□□□ 0.96
TMED1-203ENST00000588259 FAM43AQ8N2R8 423 aa21.02■□□□□ 0.96
TMED1-203ENST00000588259 SEMA3EO15041 775 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 SRGAP3O43295 1099 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 SNAPC2Q13487 334 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 DZIP1Q86YF9 867 aaKnown RBP21.01■□□□□ 0.95
TMED1-203ENST00000588259 FAM151AQ8WW52 585 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 FRAT1Q92837 279 aaPredicted RBP21.01■□□□□ 0.95
TMED1-203ENST00000588259 COPRSQ9NQ92 184 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 USP40Q9NVE5 1235 aa21.01■□□□□ 0.95
TMED1-203ENST00000588259 NFIAQ12857 509 aa21■□□□□ 0.95
TMED1-203ENST00000588259 CCDC102BQ68D86 513 aa21■□□□□ 0.95
TMED1-203ENST00000588259 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
TMED1-203ENST00000588259 PTPN22Q9Y2R2 807 aa21■□□□□ 0.95
TMED1-203ENST00000588259 KIAA0100Q14667 2235 aaKnown RBP20.99■□□□□ 0.95
TMED1-203ENST00000588259 IRF6O14896 467 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 IPO8O15397 1037 aaKnown RBP20.99■□□□□ 0.95
TMED1-203ENST00000588259 INPP5BP32019 993 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 PPIL2Q13356 520 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 ARHGEF6Q15052 776 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 ZGPATQ8N5A5 531 aaKnown RBP20.99■□□□□ 0.95
TMED1-203ENST00000588259 ARHGAP45Q92619 1136 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 ABCF2Q9UG63 623 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 SALL1Q9NSC2 1324 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 DOCK2Q92608 1830 aa20.99■□□□□ 0.95
TMED1-203ENST00000588259 TIMM10P62072 90 aa20.98■□□□□ 0.95
TMED1-203ENST00000588259 RASGRF1Q13972 1273 aa20.98■□□□□ 0.95
TMED1-203ENST00000588259 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.98■□□□□ 0.95
TMED1-203ENST00000588259 HTTP42858 3142 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 A0A1B0GUL7 405 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 BTBD19C9JJ37 291 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 TFCP2Q12800 502 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
TMED1-203ENST00000588259 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 AKAP2Q9Y2D5 859 aa20.97■□□□□ 0.95
TMED1-203ENST00000588259 ECM2O94769 699 aaPredicted RBP20.96■□□□□ 0.95
TMED1-203ENST00000588259 MVPQ14764 893 aaKnown RBP20.96■□□□□ 0.95
TMED1-203ENST00000588259 KIF22Q14807 665 aa20.96■□□□□ 0.95
TMED1-203ENST00000588259 GORABQ5T7V8 394 aa20.96■□□□□ 0.95
TMED1-203ENST00000588259 PRPF38BQ5VTL8 546 aaKnown RBP20.96■□□□□ 0.95
TMED1-203ENST00000588259 NEUROD6Q96NK8 337 aa20.96■□□□□ 0.95
TMED1-203ENST00000588259 FAM198AQ9UFP1 575 aa20.96■□□□□ 0.95
TMED1-203ENST00000588259 ZSWIM8A7E2V4 1837 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 SLC34A2O95436 690 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 TRIM27P14373 513 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 RGS3P49796 1198 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 CAP1Q01518 475 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 PPATQ06203 517 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 SPTY2D1Q68D10 685 aaPredicted RBP20.95■□□□□ 0.94
TMED1-203ENST00000588259 SLF2Q8IX21 1173 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 XAGE2Q96GT9 111 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
TMED1-203ENST00000588259 POTEFA5A3E0 1075 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 BCAR3O75815 825 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 GNAI2P04899 355 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 SLC9C1Q4G0N8 1177 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 ATF7IPQ6VMQ6 1270 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 ZFPM1Q8IX07 1006 aa20.94■□□□□ 0.94
TMED1-203ENST00000588259 ZCCHC17Q9NP64 241 aaKnown RBP20.94■□□□□ 0.94
TMED1-203ENST00000588259 TLR2O60603 784 aa20.93■□□□□ 0.94
TMED1-203ENST00000588259 PICALMQ13492 652 aa20.93■□□□□ 0.94
TMED1-203ENST00000588259 PTCH2Q9Y6C5 1203 aa20.93■□□□□ 0.94
TMED1-203ENST00000588259 RBBP6Q7Z6E9 1792 aaKnown RBP20.92■□□□□ 0.94
TMED1-203ENST00000588259 MYCP01106 439 aaPredicted RBP20.92■□□□□ 0.94
TMED1-203ENST00000588259 BTDP43251 543 aa20.92■□□□□ 0.94
TMED1-203ENST00000588259 MTX1Q13505 466 aa20.92■□□□□ 0.94
TMED1-203ENST00000588259 ARMC5Q96C12 935 aa20.92■□□□□ 0.94
TMED1-203ENST00000588259 GAKO14976 1311 aa20.92■□□□□ 0.94
TMED1-203ENST00000588259 PDHXO00330 501 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 LACTBP83111 547 aaPredicted RBP20.91■□□□□ 0.94
TMED1-203ENST00000588259 G3BP1Q13283 466 aaKnown RBP eCLIP20.91■□□□□ 0.94
TMED1-203ENST00000588259 PDS5AQ29RF7 1337 aaKnown RBP20.91■□□□□ 0.94
TMED1-203ENST00000588259 ERICH6Q7L0X2 663 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 TMEM106CQ9BVX2 250 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 ARHGAP39Q9C0H5 1083 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 PICK1Q9NRD5 415 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 CPA4Q9UI42 421 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 ZNF112Q9UJU3 913 aa20.91■□□□□ 0.94
TMED1-203ENST00000588259 MROH7-TTC4A0A0A0MT08 1334 aa20.9■□□□□ 0.94
TMED1-203ENST00000588259 ENTPD3O75355 529 aa20.9■□□□□ 0.94
TMED1-203ENST00000588259 NOL9Q5SY16 702 aaKnown RBP20.9■□□□□ 0.94
TMED1-203ENST00000588259 NBPF11Q86T75 865 aa20.9■□□□□ 0.94
TMED1-203ENST00000588259 CENPFP49454 3210 aa20.89■□□□□ 0.94
TMED1-203ENST00000588259 PNMA6EA0A0J9YXQ4 647 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 MECOMQ03112 1051 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 OS9Q13438 667 aaPredicted RBP20.89■□□□□ 0.93
TMED1-203ENST00000588259 SLC4A8Q2Y0W8 1093 aa20.89■□□□□ 0.93
TMED1-203ENST00000588259 PI16Q6UXB8 463 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms