RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
TPM4-207ENST00000588032 RAI14Q9P0K7 980 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 MYH13Q9UKX3 1938 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
TPM4-207ENST00000588032 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
TPM4-207ENST00000588032 NOGQ13253 232 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 CDC42EP5Q6NZY7 148 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 NSUN4Q96CB9 384 aaKnown RBP12.34□□□□□ -0.43
TPM4-207ENST00000588032 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
TPM4-207ENST00000588032 AOX1Q06278 1338 aa12.34□□□□□ -0.43
TPM4-207ENST00000588032 ECM29Q5VYK3 1845 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 GPR75-ASB3A0A0A6YYF3 556 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
TPM4-207ENST00000588032 ZAP70P43403 619 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
TPM4-207ENST00000588032 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
TPM4-207ENST00000588032 FAM151AQ8WW52 585 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
TPM4-207ENST00000588032 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 BAG3O95817 575 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
TPM4-207ENST00000588032 GRM1Q13255 1194 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
TPM4-207ENST00000588032 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
TPM4-207ENST00000588032 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
TPM4-207ENST00000588032 IDI2Q9BXS1 227 aa12.32□□□□□ -0.44
TPM4-207ENST00000588032 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
TPM4-207ENST00000588032 FAM155AB1AL88 458 aaPredicted RBP12.31□□□□□ -0.44
TPM4-207ENST00000588032 ENTPD3O75355 529 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 SLC10A3P09131 477 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 PLCG2P16885 1265 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 ATP5JP18859 108 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 BTDP43251 543 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 CACNB3P54284 484 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 MAP3K12Q12852 859 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
TPM4-207ENST00000588032 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
TPM4-207ENST00000588032 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 IDH1O75874 414 aaKnown RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 PPP4CP60510 307 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 PRKG1Q13976 671 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 SLC10A4Q96EP9 437 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
TPM4-207ENST00000588032 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
TPM4-207ENST00000588032 CA12O43570 354 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
TPM4-207ENST00000588032 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
TPM4-207ENST00000588032 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
TPM4-207ENST00000588032 TCP10Q12799 353 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
TPM4-207ENST00000588032 AOC2O75106 756 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
TPM4-207ENST00000588032 RGS3P49796 1198 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 RHBDL3P58872 404 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 NFIAQ12857 509 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 HAUS7Q99871 368 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
TPM4-207ENST00000588032 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.44
TPM4-207ENST00000588032 MYH2Q9UKX2 1941 aa12.27□□□□□ -0.44
TPM4-207ENST00000588032 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.44
TPM4-207ENST00000588032 GOLIM4O00461 696 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 ZBTB48P10074 688 aaPredicted RBP12.27□□□□□ -0.45
TPM4-207ENST00000588032 CYP7A1P22680 504 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 KIF23Q02241 960 aaPredicted RBP12.27□□□□□ -0.45
TPM4-207ENST00000588032 MAGEB6Q8N7X4 407 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
TPM4-207ENST00000588032 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.452e-11■□□□□ 8.1
TPM4-207ENST00000588032 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
TPM4-207ENST00000588032 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
TPM4-207ENST00000588032 INHBEP58166 350 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms