RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 DCAF15Q66K64 600 aa24.86■■□□□ 1.57
VAT1-203ENST00000587062 ZIC5Q96T25 663 aa24.86■■□□□ 1.57
VAT1-203ENST00000587062 USP40Q9NVE5 1235 aa24.86■■□□□ 1.57
VAT1-203ENST00000587062 HMG20BQ9P0W2 317 aa24.86■■□□□ 1.57
VAT1-203ENST00000587062 IGSF3O75054 1194 aa24.85■■□□□ 1.57
VAT1-203ENST00000587062 USP2O75604 605 aaPredicted RBP24.85■■□□□ 1.57
VAT1-203ENST00000587062 CACNB3P54284 484 aa24.85■■□□□ 1.57
VAT1-203ENST00000587062 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.85■■□□□ 1.57
VAT1-203ENST00000587062 LRP2BPQ9P2M1 347 aa24.85■■□□□ 1.57
VAT1-203ENST00000587062 ZBTB48P10074 688 aaPredicted RBP24.84■■□□□ 1.57
VAT1-203ENST00000587062 CDC42EP5Q6NZY7 148 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 FAM151AQ8WW52 585 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 FAM163AQ96GL9 167 aaPredicted RBP24.84■■□□□ 1.57
VAT1-203ENST00000587062 ZNF512BQ96KM6 892 aaPredicted RBP24.84■■□□□ 1.57
VAT1-203ENST00000587062 NOL10Q9BSC4 688 aaKnown RBP24.84■■□□□ 1.57
VAT1-203ENST00000587062 RAI14Q9P0K7 980 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 EXOC6BQ9Y2D4 811 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 CSADQ9Y600 493 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.84■■□□□ 1.57
VAT1-203ENST00000587062 AKAP11Q9UKA4 1901 aa24.84■■□□□ 1.57
VAT1-203ENST00000587062 SPRYD7Q5W111 196 aa24.83■■□□□ 1.57
VAT1-203ENST00000587062 TEPSINQ96N21 525 aa24.83■■□□□ 1.57
VAT1-203ENST00000587062 DBNDD2Q9BQY9 259 aa24.83■■□□□ 1.57
VAT1-203ENST00000587062 PCNTO95613 3336 aa24.83■■□□□ 1.56
VAT1-203ENST00000587062 MANSC4A6NHS7 340 aaPredicted RBP24.82■■□□□ 1.56
VAT1-203ENST00000587062 TRPA1O75762 1119 aa24.82■■□□□ 1.56
VAT1-203ENST00000587062 MAP4K4O95819 1239 aaPredicted RBP24.82■■□□□ 1.56
VAT1-203ENST00000587062 MAP3K9P80192 1104 aa24.82■■□□□ 1.56
VAT1-203ENST00000587062 CLASRPQ8N2M8 674 aaKnown RBP24.82■■□□□ 1.56
VAT1-203ENST00000587062 RNF186Q9NXI6 227 aa24.82■■□□□ 1.56
VAT1-203ENST00000587062 FZD1Q9UP38 647 aa24.82■■□□□ 1.56
VAT1-203ENST00000587062 RPAP1Q9BWH6 1393 aaPredicted RBP24.81■■□□□ 1.56
VAT1-203ENST00000587062 RAB11FIP3O75154 756 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 MCAMP43121 646 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 TM4SF4P48230 202 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 MECOMQ03112 1051 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 KIF1BPQ96EK5 621 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 TSKSQ9UJT2 592 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 GAKO14976 1311 aa24.81■■□□□ 1.56
VAT1-203ENST00000587062 MYH2Q9UKX2 1941 aa24.8■■□□□ 1.56
VAT1-203ENST00000587062 SSC5DA1L4H1 1573 aa24.8■■□□□ 1.56
VAT1-203ENST00000587062 ALDH1A1P00352 501 aa24.8■■□□□ 1.56
VAT1-203ENST00000587062 MKRN3Q13064 507 aaKnown RBP24.8■■□□□ 1.56
VAT1-203ENST00000587062 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
VAT1-203ENST00000587062 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
VAT1-203ENST00000587062 CCDC8Q9H0W5 538 aaPredicted RBP24.8■■□□□ 1.56
VAT1-203ENST00000587062 MROH7-TTC4A0A0A0MT08 1334 aa24.8■■□□□ 1.56
VAT1-203ENST00000587062 ENTPD3O75355 529 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 TCP10Q12799 353 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 AACSQ86V21 672 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 RHPN1Q8TCX5 695 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 WNK4Q96J92 1243 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 ZNF341Q9BYN7 854 aa24.79■■□□□ 1.56
VAT1-203ENST00000587062 BTDP43251 543 aa24.78■■□□□ 1.56
VAT1-203ENST00000587062 TBC1D9Q6ZT07 1266 aa24.78■■□□□ 1.56
VAT1-203ENST00000587062 NSUN4Q96CB9 384 aaKnown RBP24.78■■□□□ 1.56
VAT1-203ENST00000587062 EAF2Q96CJ1 260 aaPredicted RBP24.78■■□□□ 1.56
VAT1-203ENST00000587062 CLMNQ96JQ2 1002 aa24.78■■□□□ 1.56
VAT1-203ENST00000587062 IDI2Q9BXS1 227 aa24.78■■□□□ 1.56
VAT1-203ENST00000587062 GPR75-ASB3A0A0A6YYF3 556 aa24.77■■□□□ 1.56
VAT1-203ENST00000587062 BAG3O95817 575 aa24.77■■□□□ 1.56
VAT1-203ENST00000587062 PI16Q6UXB8 463 aa24.77■■□□□ 1.56
VAT1-203ENST00000587062 ZSCAN29Q8IWY8 852 aaPredicted RBP24.77■■□□□ 1.56
VAT1-203ENST00000587062 SNRKQ9NRH2 765 aa24.77■■□□□ 1.56
VAT1-203ENST00000587062 DBNLQ9UJU6 430 aaKnown RBP24.77■■□□□ 1.56
VAT1-203ENST00000587062 AK9Q5TCS8 1911 aa24.76■■□□□ 1.55
VAT1-203ENST00000587062 IFIT2P09913 472 aaKnown RBP24.76■■□□□ 1.55
VAT1-203ENST00000587062 C20orf194Q5TEA3 1177 aa24.76■■□□□ 1.55
VAT1-203ENST00000587062 NAA16Q6N069 864 aaPredicted RBP24.76■■□□□ 1.55
VAT1-203ENST00000587062 ELP3Q9H9T3 547 aa24.76■■□□□ 1.55
VAT1-203ENST00000587062 APBB1O00213 710 aa24.75■■□□□ 1.55
VAT1-203ENST00000587062 PLCG2P16885 1265 aa24.75■■□□□ 1.55
VAT1-203ENST00000587062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.75■■□□□ 1.55
VAT1-203ENST00000587062 WRNIP1Q96S55 665 aa24.75■■□□□ 1.55
VAT1-203ENST00000587062 RGS3P49796 1198 aa24.74■■□□□ 1.55
VAT1-203ENST00000587062 NFIAQ12857 509 aa24.74■■□□□ 1.55
VAT1-203ENST00000587062 TMED8Q6PL24 325 aaPredicted RBP24.74■■□□□ 1.55
VAT1-203ENST00000587062 CDAN1Q8IWY9 1227 aa24.74■■□□□ 1.55
VAT1-203ENST00000587062 OPTNQ96CV9 577 aa24.74■■□□□ 1.55
VAT1-203ENST00000587062 IL1RAPL2Q9NP60 686 aa24.74■■□□□ 1.55
VAT1-203ENST00000587062 ZAP70P43403 619 aa24.73■■□□□ 1.55
VAT1-203ENST00000587062 VGLL4Q14135 290 aa24.73■■□□□ 1.55
VAT1-203ENST00000587062 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.73■■□□□ 1.55
VAT1-203ENST00000587062 MIGA2Q7L4E1 593 aa24.73■■□□□ 1.55
VAT1-203ENST00000587062 FAM198AQ9UFP1 575 aa24.73■■□□□ 1.55
VAT1-203ENST00000587062 NPM3O75607 178 aaKnown RBP24.72■■□□□ 1.55
VAT1-203ENST00000587062 WDHD1O75717 1129 aaPredicted RBP24.72■■□□□ 1.55
VAT1-203ENST00000587062 CYP2E1P05181 493 aaPredicted RBP24.72■■□□□ 1.55
VAT1-203ENST00000587062 GTF2A2P52657 109 aa24.72■■□□□ 1.55
VAT1-203ENST00000587062 TTF1Q15361 905 aaPredicted RBP24.72■■□□□ 1.55
VAT1-203ENST00000587062 ERO1BQ86YB8 467 aa24.72■■□□□ 1.55
VAT1-203ENST00000587062 CERS3Q8IU89 383 aa24.72■■□□□ 1.55
VAT1-203ENST00000587062 SIRT2Q8IXJ6 389 aa24.72■■□□□ 1.55
VAT1-203ENST00000587062 TLR7Q9NYK1 1049 aaKnown RBP24.72■■□□□ 1.55
VAT1-203ENST00000587062 PICALMQ13492 652 aa24.71■■□□□ 1.55
VAT1-203ENST00000587062 MAP3K12Q12852 859 aa24.7■■□□□ 1.54
VAT1-203ENST00000587062 IFNL1Q8IU54 200 aa24.7■■□□□ 1.54
VAT1-203ENST00000587062 BCL11AQ9H165 835 aa24.7■■□□□ 1.54
VAT1-203ENST00000587062 IDH1O75874 414 aaKnown RBP24.69■■□□□ 1.54
VAT1-203ENST00000587062 TEX11Q8IYF3 940 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms