RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 SAGE1Q9NXZ1 904 aa16.35■□□□□ 0.21
CALR-203ENST00000586803 HMG20BQ9P0W2 317 aa16.35■□□□□ 0.21
CALR-203ENST00000586803 ABCF2Q9UG63 623 aa16.35■□□□□ 0.21
CALR-203ENST00000586803 DOCK1Q14185 1865 aa16.35■□□□□ 0.21
CALR-203ENST00000586803 MCAMP43121 646 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 LBX1P52954 281 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 CACNB3P54284 484 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
CALR-203ENST00000586803 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
CALR-203ENST00000586803 DBNDD2Q9BQY9 259 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
CALR-203ENST00000586803 MYH7P12883 1935 aa16.33■□□□□ 0.21
CALR-203ENST00000586803 PI16Q6UXB8 463 aa16.33■□□□□ 0.2
CALR-203ENST00000586803 ERICH6Q7L0X2 663 aa16.33■□□□□ 0.2
CALR-203ENST00000586803 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.2
CALR-203ENST00000586803 HOOK2Q96ED9 719 aa16.33■□□□□ 0.2
CALR-203ENST00000586803 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
CALR-203ENST00000586803 FZD1Q9UP38 647 aa16.33■□□□□ 0.2
CALR-203ENST00000586803 COL2A1P02458 1487 aaPredicted RBP16.32■□□□□ 0.2
CALR-203ENST00000586803 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
CALR-203ENST00000586803 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
CALR-203ENST00000586803 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
CALR-203ENST00000586803 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
CALR-203ENST00000586803 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
CALR-203ENST00000586803 ATAD5Q96QE3 1844 aa16.32■□□□□ 0.2
CALR-203ENST00000586803 TLR7Q9NYK1 1049 aaKnown RBP16.32■□□□□ 0.2
CALR-203ENST00000586803 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
CALR-203ENST00000586803 GSTO1P78417 241 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 SREBF2Q12772 1141 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
CALR-203ENST00000586803 BTDP43251 543 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 MECOMQ03112 1051 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 DCAF15Q66K64 600 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.3■□□□□ 0.21e-85■■□□□ 14.4
CALR-203ENST00000586803 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 WNK4Q96J92 1243 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
CALR-203ENST00000586803 IGSF3O75054 1194 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
CALR-203ENST00000586803 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
CALR-203ENST00000586803 NFIAQ12857 509 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 AACSQ86V21 672 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
CALR-203ENST00000586803 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
CALR-203ENST00000586803 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
CALR-203ENST00000586803 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
CALR-203ENST00000586803 MKRN3Q13064 507 aaKnown RBP16.28■□□□□ 0.2
CALR-203ENST00000586803 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
CALR-203ENST00000586803 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
CALR-203ENST00000586803 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
CALR-203ENST00000586803 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
CALR-203ENST00000586803 USP40Q9NVE5 1235 aa16.28■□□□□ 0.2
CALR-203ENST00000586803 CSADQ9Y600 493 aa16.28■□□□□ 0.2
CALR-203ENST00000586803 PTPRFP10586 1907 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 MANSC4A6NHS7 340 aaPredicted RBP16.27■□□□□ 0.2
CALR-203ENST00000586803 RAB11FIP3O75154 756 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 ENTPD3O75355 529 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 MAP4K4O95819 1239 aaPredicted RBP16.27■□□□□ 0.2
CALR-203ENST00000586803 LDHCP07864 332 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 VGLL4Q14135 290 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
CALR-203ENST00000586803 SLC10A4Q96EP9 437 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 WRNIP1Q96S55 665 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 ZNF341Q9BYN7 854 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 SNRKQ9NRH2 765 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 RNF186Q9NXI6 227 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.2
CALR-203ENST00000586803 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 MYH1P12882 1939 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 GPR75-ASB3A0A0A6YYF3 556 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 ZAP70P43403 619 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 RGS3P49796 1198 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 TCP10Q12799 353 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 ELP3Q9H9T3 547 aa16.26■□□□□ 0.19
CALR-203ENST00000586803 APBB1O00213 710 aa16.25■□□□□ 0.19
CALR-203ENST00000586803 WDHD1O75717 1129 aaPredicted RBP16.25■□□□□ 0.19
CALR-203ENST00000586803 TRPA1O75762 1119 aa16.25■□□□□ 0.19
CALR-203ENST00000586803 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
CALR-203ENST00000586803 TM4SF4P48230 202 aa16.25■□□□□ 0.19
CALR-203ENST00000586803 RHBDL3P58872 404 aa16.25■□□□□ 0.19
CALR-203ENST00000586803 NAA16Q6N069 864 aaPredicted RBP16.25■□□□□ 0.19
CALR-203ENST00000586803 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
CALR-203ENST00000586803 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms