RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 PRDX5P30044 214 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 SNAPC2Q13487 334 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 ATP2B3Q16720 1220 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 DCAF15Q66K64 600 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 FAM151AQ8WW52 585 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 HOOK2Q96ED9 719 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 ZNF341Q9BYN7 854 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 USP40Q9NVE5 1235 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 DAGLAQ9Y4D2 1042 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 KIF16BQ96L93 1317 aa25.09■■□□□ 1.61
CLPTM1-204ENST00000585961 NFIAQ12857 509 aa25.08■■□□□ 1.61
CLPTM1-204ENST00000585961 ARHGEF6Q15052 776 aa25.08■■□□□ 1.61
CLPTM1-204ENST00000585961 ZFPM1Q8IX07 1006 aa25.08■■□□□ 1.61
CLPTM1-204ENST00000585961 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.08■■□□□ 1.61
CLPTM1-204ENST00000585961 TMEM106CQ9BVX2 250 aa25.08■■□□□ 1.61
CLPTM1-204ENST00000585961 TLR2O60603 784 aa25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 WDHD1O75717 1129 aaPredicted RBP25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 LDHBP07195 334 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 PHKA1P46020 1223 aa25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 PPIL2Q13356 520 aa25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 SLC9C1Q4G0N8 1177 aa25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 GNL3LQ9NVN8 582 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 LRRFIP2Q9Y608 721 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-204ENST00000585961 ADORA1P30542 326 aa25.06■■□□□ 1.6
CLPTM1-204ENST00000585961 NBPF11Q86T75 865 aa25.06■■□□□ 1.6
CLPTM1-204ENST00000585961 OTOFQ9HC10 1997 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 TIMM10P62072 90 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 SLC4A8Q2Y0W8 1093 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 TRMT2AQ8IZ69 625 aaKnown RBP25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 SH3TC2Q8TF17 1288 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 ZNF333Q96JL9 665 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 FAM198AQ9UFP1 575 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 CPA4Q9UI42 421 aa25.05■■□□□ 1.6
CLPTM1-204ENST00000585961 CIAO1O76071 339 aa25.04■■□□□ 1.6
CLPTM1-204ENST00000585961 PPATQ06203 517 aa25.04■■□□□ 1.6
CLPTM1-204ENST00000585961 KIF22Q14807 665 aa25.04■■□□□ 1.6
CLPTM1-204ENST00000585961 LACTBP83111 547 aaPredicted RBP25.03■■□□□ 1.6
CLPTM1-204ENST00000585961 ZNF112Q9UJU3 913 aa25.03■■□□□ 1.6
CLPTM1-204ENST00000585961 MEIS3Q99687 375 aa25.02■■□□□ 1.6
CLPTM1-204ENST00000585961 DENND2AQ9ULE3 1009 aa25.02■■□□□ 1.6
CLPTM1-204ENST00000585961 KIAA0100Q14667 2235 aaKnown RBP25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 PDHXO00330 501 aa25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 IL15P40933 162 aaPredicted RBP25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 CCDC102BQ68D86 513 aa25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 C17orf99Q6UX52 265 aa25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 API5Q9BZZ5 524 aaKnown RBP25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 PCDH10Q9P2E7 1040 aa25.01■■□□□ 1.59
CLPTM1-204ENST00000585961 SLURP2P0DP57 97 aa25■■□□□ 1.59
CLPTM1-204ENST00000585961 ABCF2Q9UG63 623 aa25■■□□□ 1.59
CLPTM1-204ENST00000585961 FBXO3Q9UK99 471 aa25■■□□□ 1.59
CLPTM1-204ENST00000585961 ARAP2Q8WZ64 1704 aa25■■□□□ 1.59
CLPTM1-204ENST00000585961 CTGFP29279 349 aa24.99■■□□□ 1.59
CLPTM1-204ENST00000585961 PSMC4P43686 418 aa24.99■■□□□ 1.59
CLPTM1-204ENST00000585961 ZCCHC17Q9NP64 241 aaKnown RBP24.99■■□□□ 1.59
CLPTM1-204ENST00000585961 BRCA2P51587 3418 aa24.98■■□□□ 1.59
CLPTM1-204ENST00000585961 ANKRD23Q86SG2 305 aa24.98■■□□□ 1.59
CLPTM1-204ENST00000585961 ZSCAN29Q8IWY8 852 aaPredicted RBP24.98■■□□□ 1.59
CLPTM1-204ENST00000585961 FMNL1O95466 1100 aaPredicted RBP24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 RGS3P49796 1198 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 MOGSQ13724 837 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 COPRSQ9NQ92 184 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 KCNH4Q9UQ05 1017 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 HDAC5Q9UQL6 1122 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 LAMB1P07942 1786 aa24.97■■□□□ 1.59
CLPTM1-204ENST00000585961 RARSP54136 660 aaKnown RBP24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 TFCP2Q12800 502 aa24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 SH3BP5LQ7L8J4 393 aa24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 GCC1Q96CN9 775 aa24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 TRIM47Q96LD4 638 aa24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 ZHX2Q9Y6X8 837 aa24.96■■□□□ 1.59
CLPTM1-204ENST00000585961 RPAP1Q9BWH6 1393 aaPredicted RBP24.95■■□□□ 1.59
CLPTM1-204ENST00000585961 SALL1Q9NSC2 1324 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 PHF20L1A8MW92 1017 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 SEMA3EO15041 775 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 PICALMQ13492 652 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 RASGRF1Q13972 1273 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 HABP4Q5JVS0 413 aaKnown RBP24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 DZIP1Q86YF9 867 aaKnown RBP24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 XAGE2Q96GT9 111 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 NEUROD6Q96NK8 337 aa24.95■■□□□ 1.58
CLPTM1-204ENST00000585961 AK9Q5TCS8 1911 aa24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 SRGAP3O43295 1099 aa24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 CYP2C8P10632 490 aa24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 MTFR1Q15390 333 aa24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 NOL9Q5SY16 702 aaKnown RBP24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 GPAT2Q6NUI2 795 aa24.94■■□□□ 1.58
CLPTM1-204ENST00000585961 A0A1B0GUL7 405 aa24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 DDTLA6NHG4 134 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 CXCL11O14625 94 aa24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 CT47B1P0C2W7 299 aaPredicted RBP24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 OSBPP22059 807 aa24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 ZGPATQ8N5A5 531 aaKnown RBP24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 DDX4Q9NQI0 724 aaKnown RBP24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 PICK1Q9NRD5 415 aa24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 SRRDQ9UH36 339 aa24.93■■□□□ 1.58
CLPTM1-204ENST00000585961 GNRH1P01148 92 aa24.92■■□□□ 1.58
CLPTM1-204ENST00000585961 RAET1EQ8TD07 263 aa24.92■■□□□ 1.58
CLPTM1-204ENST00000585961 IDI2Q9BXS1 227 aa24.92■■□□□ 1.58
CLPTM1-204ENST00000585961 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms