RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 TDRD3Q9H7E2 651 aaKnown RBP28.28■■■□□ 2.12
LSM7-202ENST00000585395 TMOD2Q9NZR1 351 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 PPP2R3BQ9Y5P8 575 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 GPR25O00155 361 aa28.27■■■□□ 2.12
LSM7-202ENST00000585395 PRKG1Q13976 671 aa28.27■■■□□ 2.12
LSM7-202ENST00000585395 LDHBP07195 334 aaKnown RBP28.26■■■□□ 2.11
LSM7-202ENST00000585395 UQCRFS1P1P0C7P4 283 aa28.26■■■□□ 2.11
LSM7-202ENST00000585395 ARMC9Q7Z3E5 817 aa28.26■■■□□ 2.11
LSM7-202ENST00000585395 ZGPATQ8N5A5 531 aaKnown RBP28.26■■■□□ 2.11
LSM7-202ENST00000585395 ZNF70Q9UC06 446 aaPredicted RBP28.26■■■□□ 2.11
LSM7-202ENST00000585395 TNNI2P48788 182 aa28.25■■■□□ 2.11
LSM7-202ENST00000585395 SPDYE2Q495Y8 402 aa28.25■■■□□ 2.11
LSM7-202ENST00000585395 AACSQ86V21 672 aa28.25■■■□□ 2.11
LSM7-202ENST00000585395 UBE2Q2LH0YL09 131 aa28.24■■■□□ 2.11
LSM7-202ENST00000585395 IFIT2P09913 472 aaKnown RBP28.24■■■□□ 2.11
LSM7-202ENST00000585395 MOB2Q70IA6 237 aa28.24■■■□□ 2.11
LSM7-202ENST00000585395 CFHR5Q9BXR6 569 aa28.24■■■□□ 2.11
LSM7-202ENST00000585395 IL1RAPL2Q9NP60 686 aa28.24■■■□□ 2.11
LSM7-202ENST00000585395 TCP10L2B9ZVM9 353 aa28.23■■■□□ 2.11
LSM7-202ENST00000585395 SREBF2Q12772 1141 aa28.23■■■□□ 2.11
LSM7-202ENST00000585395 SUPT20HL1Q3ZLR7 823 aa28.23■■■□□ 2.11
LSM7-202ENST00000585395 TTC39AQ5SRH9 613 aa28.23■■■□□ 2.11
LSM7-202ENST00000585395 ABCF2Q9UG63 623 aa28.23■■■□□ 2.11
LSM7-202ENST00000585395 AOX1Q06278 1338 aa28.22■■■□□ 2.11
LSM7-202ENST00000585395 PRDX5P30044 214 aa28.22■■■□□ 2.11
LSM7-202ENST00000585395 RASGRF1Q13972 1273 aa28.22■■■□□ 2.11
LSM7-202ENST00000585395 RASA3Q14644 834 aa28.22■■■□□ 2.11
LSM7-202ENST00000585395 EAF2Q96CJ1 260 aaPredicted RBP28.22■■■□□ 2.11
LSM7-202ENST00000585395 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.22■■■□□ 2.11
LSM7-202ENST00000585395 ANGEL1Q9UNK9 670 aaKnown RBP28.22■■■□□ 2.11
LSM7-202ENST00000585395 PDS5AQ29RF7 1337 aaKnown RBP28.21■■■□□ 2.11
LSM7-202ENST00000585395 PPP1R12BO60237 982 aaPredicted RBP28.21■■■□□ 2.11
LSM7-202ENST00000585395 FKTNO75072 461 aa28.21■■■□□ 2.11
LSM7-202ENST00000585395 DZIP1Q86YF9 867 aaKnown RBP28.21■■■□□ 2.11
LSM7-202ENST00000585395 ZDHHC15Q96MV8 337 aa28.21■■■□□ 2.11
LSM7-202ENST00000585395 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
LSM7-202ENST00000585395 MRIQ9BWK5 157 aa28.21■■■□□ 2.11
LSM7-202ENST00000585395 CCDC8Q9H0W5 538 aaPredicted RBP28.21■■■□□ 2.11
LSM7-202ENST00000585395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.21■■■□□ 2.11
LSM7-202ENST00000585395 SALL1Q9NSC2 1324 aa28.2■■■□□ 2.11
LSM7-202ENST00000585395 SPTY2D1Q68D10 685 aaPredicted RBP28.2■■■□□ 2.1
LSM7-202ENST00000585395 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.1
LSM7-202ENST00000585395 HABP4Q5JVS0 413 aaKnown RBP28.19■■■□□ 2.1
LSM7-202ENST00000585395 ZNF512BQ96KM6 892 aaPredicted RBP28.19■■■□□ 2.1
LSM7-202ENST00000585395 DBNLQ9UJU6 430 aaKnown RBP28.19■■■□□ 2.1
LSM7-202ENST00000585395 ARID4AP29374 1257 aaPredicted RBP28.18■■■□□ 2.1
LSM7-202ENST00000585395 DIXDC1Q155Q3 683 aa28.18■■■□□ 2.1
LSM7-202ENST00000585395 CACNB3P54284 484 aa28.17■■■□□ 2.1
LSM7-202ENST00000585395 NBPF12Q5TAG4 269 aaPredicted RBP28.17■■■□□ 2.1
LSM7-202ENST00000585395 SLF2Q8IX21 1173 aa28.17■■■□□ 2.1
LSM7-202ENST00000585395 GPATCH3Q96I76 525 aa28.17■■■□□ 2.1
LSM7-202ENST00000585395 BCL11AQ9H165 835 aa28.17■■■□□ 2.1
LSM7-202ENST00000585395 MYH2Q9UKX2 1941 aa28.16■■■□□ 2.1
LSM7-202ENST00000585395 ERICH6Q7L0X2 663 aa28.16■■■□□ 2.1
LSM7-202ENST00000585395 SPATA5Q8NB90 893 aa28.16■■■□□ 2.1
LSM7-202ENST00000585395 DAGLAQ9Y4D2 1042 aa28.16■■■□□ 2.1
LSM7-202ENST00000585395 ALDH1A1P00352 501 aa28.15■■■□□ 2.1
LSM7-202ENST00000585395 IREB2P48200 963 aaKnown RBP28.15■■■□□ 2.1
LSM7-202ENST00000585395 APOBEC3HQ6NTF7 200 aaKnown RBP28.15■■■□□ 2.1
LSM7-202ENST00000585395 FZD1Q9UP38 647 aa28.15■■■□□ 2.1
LSM7-202ENST00000585395 HTTP42858 3142 aa28.15■■■□□ 2.1
LSM7-202ENST00000585395 MKI67P46013 3256 aaKnown RBP28.15■■■□□ 2.1
LSM7-202ENST00000585395 MKRN3Q13064 507 aaKnown RBP28.14■■■□□ 2.1
LSM7-202ENST00000585395 TMEM39BQ9GZU3 492 aa28.14■■■□□ 2.1
LSM7-202ENST00000585395 HMG20BQ9P0W2 317 aa28.14■■■□□ 2.1
LSM7-202ENST00000585395 AK9Q5TCS8 1911 aa28.14■■■□□ 2.09
LSM7-202ENST00000585395 TLR7Q9NYK1 1049 aaKnown RBP28.13■■■□□ 2.09
LSM7-202ENST00000585395 IGSF3O75054 1194 aa28.12■■■□□ 2.09
LSM7-202ENST00000585395 ANKRD45Q5TZF3 282 aa28.12■■■□□ 2.09
LSM7-202ENST00000585395 PI16Q6UXB8 463 aa28.12■■■□□ 2.09
LSM7-202ENST00000585395 RAI14Q9P0K7 980 aa28.12■■■□□ 2.09
LSM7-202ENST00000585395 SSC5DA1L4H1 1573 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 SMARCA5O60264 1052 aaPredicted RBP28.11■■■□□ 2.09
LSM7-202ENST00000585395 MCAMP43121 646 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 SMC5Q8IY18 1101 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.11■■■□□ 2.09
LSM7-202ENST00000585395 R3HDMLQ9H3Y0 253 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 USP40Q9NVE5 1235 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 LRP2BPQ9P2M1 347 aa28.11■■■□□ 2.09
LSM7-202ENST00000585395 GSTO1P78417 241 aa28.1■■■□□ 2.09
LSM7-202ENST00000585395 FKBP1CQ5VVH2 108 aa28.1■■■□□ 2.09
LSM7-202ENST00000585395 HOOK2Q96ED9 719 aa28.1■■■□□ 2.09
LSM7-202ENST00000585395 SLC10A4Q96EP9 437 aa28.1■■■□□ 2.09
LSM7-202ENST00000585395 SNRKQ9NRH2 765 aa28.1■■■□□ 2.09
LSM7-202ENST00000585395 INHBEP58166 350 aa28.09■■■□□ 2.09
LSM7-202ENST00000585395 SPRYD7Q5W111 196 aa28.09■■■□□ 2.09
LSM7-202ENST00000585395 CDC42EP5Q6NZY7 148 aa28.09■■■□□ 2.09
LSM7-202ENST00000585395 FAM83AQ86UY5 434 aa28.09■■■□□ 2.09
LSM7-202ENST00000585395 LDHCP07864 332 aa28.08■■■□□ 2.09
LSM7-202ENST00000585395 LDLRAD1Q5T700 205 aa28.08■■■□□ 2.09
LSM7-202ENST00000585395 TBC1D9Q6ZT07 1266 aa28.08■■■□□ 2.09
LSM7-202ENST00000585395 IGHDP01880 384 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 MECOMQ03112 1051 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 TCP10Q12799 353 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 MAP3K11Q16584 847 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 NOL10Q9BSC4 688 aaKnown RBP28.07■■■□□ 2.08
LSM7-202ENST00000585395 ECHDC1Q9NTX5 307 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 TRIM17Q9Y577 477 aa28.07■■■□□ 2.08
LSM7-202ENST00000585395 MANSC4A6NHS7 340 aaPredicted RBP28.06■■■□□ 2.08
LSM7-202ENST00000585395 USP2O75604 605 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms