RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-202ENST00000585333 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.07
TRIM47-202ENST00000585333 GLTPD2A6NH11 291 aa15.46■□□□□ 0.07
TRIM47-202ENST00000585333 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
TRIM47-202ENST00000585333 NT5C2P49902 561 aa15.46■□□□□ 0.07
TRIM47-202ENST00000585333 TNFAIP1Q13829 316 aa15.46■□□□□ 0.07
TRIM47-202ENST00000585333 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
TRIM47-202ENST00000585333 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.07
TRIM47-202ENST00000585333 STRBPQ96SI9 672 aaKnown RBP15.46■□□□□ 0.07
TRIM47-202ENST00000585333 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
TRIM47-202ENST00000585333 AATFQ9NY61 560 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM47-202ENST00000585333 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
TRIM47-202ENST00000585333 APPP05067 770 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 USP5P45974 858 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 SCNN1DP51172 638 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 ALX1Q15699 326 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 CFAP100Q494V2 611 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 FKBP1CQ5VVH2 108 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 MICALL2Q8IY33 904 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 MIGA1Q8NAN2 632 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 RIOK1Q9BRS2 568 aaKnown RBP15.45■□□□□ 0.06
TRIM47-202ENST00000585333 MYOZ2Q9NPC6 264 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 GPRC5DQ9NZD1 345 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 CNOT7Q9UIV1 285 aaKnown RBP15.45■□□□□ 0.06
TRIM47-202ENST00000585333 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-202ENST00000585333 SLC4A4Q9Y6R1 1079 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 ZNF646O15015 1829 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-202ENST00000585333 MYH2Q9UKX2 1941 aa15.45■□□□□ 0.06
TRIM47-202ENST00000585333 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 M0R2C6 588 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 ZKSCAN1P17029 563 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-202ENST00000585333 TNNI2P48788 182 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 MXD3Q9BW11 206 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 NAPBQ9H115 298 aa15.44■□□□□ 0.06
TRIM47-202ENST00000585333 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
TRIM47-202ENST00000585333 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
TRIM47-202ENST00000585333 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
TRIM47-202ENST00000585333 TDO2P48775 406 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 GRIK5Q16478 980 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 LCORLQ8N3X6 602 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 ZNF384Q8TF68 577 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 MAP4K1Q92918 833 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 ARMT1Q9H993 441 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 USP40Q9NVE5 1235 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 ARPP21Q9UBL0 812 aaPredicted RBP15.43■□□□□ 0.06
TRIM47-202ENST00000585333 HACL1Q9UJ83 578 aa15.43■□□□□ 0.06
TRIM47-202ENST00000585333 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 KRT32Q14532 448 aa15.42■□□□□ 0.06
TRIM47-202ENST00000585333 IMMTQ16891 758 aaKnown RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 KIF4BQ2VIQ3 1234 aa15.42■□□□□ 0.06
TRIM47-202ENST00000585333 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 USP50Q70EL3 339 aaPredicted RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 ADGRA1Q86SQ6 560 aa15.42■□□□□ 0.06
TRIM47-202ENST00000585333 ZNF589Q86UQ0 364 aaPredicted RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 PNMA8AQ86V59 439 aaPredicted RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
TRIM47-202ENST00000585333 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
TRIM47-202ENST00000585333 IDI2Q9BXS1 227 aa15.42■□□□□ 0.06
TRIM47-202ENST00000585333 ENTPD3O75355 529 aa15.41■□□□□ 0.06
TRIM47-202ENST00000585333 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
TRIM47-202ENST00000585333 ANAPC15P60006 121 aa15.41■□□□□ 0.06
TRIM47-202ENST00000585333 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
TRIM47-202ENST00000585333 LSG1Q9H089 658 aaKnown RBP15.41■□□□□ 0.06
TRIM47-202ENST00000585333 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
TRIM47-202ENST00000585333 COL2A1P02458 1487 aaPredicted RBP15.4■□□□□ 0.06
TRIM47-202ENST00000585333 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 RHBDL3P58872 404 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 CDC42EP5Q6NZY7 148 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 FAM83AQ86UY5 434 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 IFNL3Q8IZI9 196 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 SH3RF3Q8TEJ3 882 aaPredicted RBP15.4■□□□□ 0.06
TRIM47-202ENST00000585333 ZC3H15Q8WU90 426 aaKnown RBP15.4■□□□□ 0.06
TRIM47-202ENST00000585333 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
TRIM47-202ENST00000585333 PPP2R3BQ9Y5P8 575 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
TRIM47-202ENST00000585333 SCN4AP35499 1836 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 WNT10BO00744 389 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 ZNF213O14771 459 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
TRIM47-202ENST00000585333 SBK1Q52WX2 424 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
TRIM47-202ENST00000585333 C22orf23Q9BZE7 217 aa15.39■□□□□ 0.05
TRIM47-202ENST00000585333 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
TRIM47-202ENST00000585333 HSPA4P34932 840 aa15.38■□□□□ 0.05
TRIM47-202ENST00000585333 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
TRIM47-202ENST00000585333 PRMT6Q96LA8 375 aaPredicted RBP15.38■□□□□ 0.05
TRIM47-202ENST00000585333 DCP1AQ9NPI6 582 aaPredicted RBP15.38■□□□□ 0.05
TRIM47-202ENST00000585333 MCM9Q9NXL9 1143 aa15.38■□□□□ 0.05
TRIM47-202ENST00000585333 ZNF70Q9UC06 446 aaPredicted RBP15.38■□□□□ 0.05
TRIM47-202ENST00000585333 FLT1P17948 1338 aa15.38■□□□□ 0.05
TRIM47-202ENST00000585333 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms