RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 VAMP4O75379 141 aa22.96■■□□□ 1.27
TOP3A-220ENST00000585031 TAF7LQ5H9L4 462 aa22.96■■□□□ 1.27
TOP3A-220ENST00000585031 U2AF1L4Q8WU68 220 aaKnown RBP22.96■■□□□ 1.27
TOP3A-220ENST00000585031 GABRQQ9UN88 632 aa22.96■■□□□ 1.27
TOP3A-220ENST00000585031 UNC80Q8N2C7 3258 aa22.96■■□□□ 1.27
TOP3A-220ENST00000585031 DOCK3Q8IZD9 2030 aa22.96■■□□□ 1.27
TOP3A-220ENST00000585031 FARP2O94887 1054 aaPredicted RBP22.95■■□□□ 1.26
TOP3A-220ENST00000585031 FMNL1O95466 1100 aaPredicted RBP22.95■■□□□ 1.26
TOP3A-220ENST00000585031 HDLBPQ00341 1268 aaKnown RBP22.95■■□□□ 1.26
TOP3A-220ENST00000585031 PRKCZQ05513 592 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 GPR153Q6NV75 609 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 ANKRD23Q86SG2 305 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 MYPNQ86TC9 1320 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 FAM83AQ86UY5 434 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 UNC93B1Q9H1C4 597 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 STAP2Q9UGK3 403 aa22.95■■□□□ 1.26
TOP3A-220ENST00000585031 AK9Q5TCS8 1911 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 GRM8O00222 908 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 SGPL1O95470 568 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 PPATQ06203 517 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 CCDC184Q52MB2 194 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 TEKT1Q969V4 418 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 ZDHHC15Q96MV8 337 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 KCNH4Q9UQ05 1017 aa22.94■■□□□ 1.26
TOP3A-220ENST00000585031 EVI5O60447 810 aa22.93■■□□□ 1.26
TOP3A-220ENST00000585031 UBXN2AP68543 259 aa22.93■■□□□ 1.26
TOP3A-220ENST00000585031 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
TOP3A-220ENST00000585031 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 BCRP11274 1271 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 CAPN2P17655 700 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 FKBP1CQ5VVH2 108 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 GPAT2Q6NUI2 795 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 SUCLG2Q96I99 432 aa22.92■■□□□ 1.26
TOP3A-220ENST00000585031 BIN2Q9UBW5 565 aaPredicted RBP22.92■■□□□ 1.26
TOP3A-220ENST00000585031 BMP8BP34820 402 aa22.91■■□□□ 1.26
TOP3A-220ENST00000585031 LRRC24Q50LG9 513 aa22.91■■□□□ 1.26
TOP3A-220ENST00000585031 ZNF341Q9BYN7 854 aa22.91■■□□□ 1.26
TOP3A-220ENST00000585031 ZNF112Q9UJU3 913 aa22.91■■□□□ 1.26
TOP3A-220ENST00000585031 CYP2C8P10632 490 aa22.9■■□□□ 1.26
TOP3A-220ENST00000585031 BCAMP50895 628 aa22.9■■□□□ 1.26
TOP3A-220ENST00000585031 GDF15Q99988 308 aa22.9■■□□□ 1.26
TOP3A-220ENST00000585031 MRIQ9BWK5 157 aa22.9■■□□□ 1.26
TOP3A-220ENST00000585031 RPAP1Q9BWH6 1393 aaPredicted RBP22.89■■□□□ 1.26
TOP3A-220ENST00000585031 IL16Q14005 1332 aa22.89■■□□□ 1.26
TOP3A-220ENST00000585031 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.25
TOP3A-220ENST00000585031 VGLL2Q8N8G2 317 aa22.89■■□□□ 1.25
TOP3A-220ENST00000585031 SLAIN1Q8ND83 568 aa22.89■■□□□ 1.25
TOP3A-220ENST00000585031 ELNP15502 786 aa22.88■■□□□ 1.25
TOP3A-220ENST00000585031 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
TOP3A-220ENST00000585031 DCAF15Q66K64 600 aa22.88■■□□□ 1.25
TOP3A-220ENST00000585031 TBC1D22AQ8WUA7 517 aa22.88■■□□□ 1.25
TOP3A-220ENST00000585031 HOOK2Q96ED9 719 aa22.88■■□□□ 1.25
TOP3A-220ENST00000585031 STXBP5LQ9Y2K9 1186 aa22.88■■□□□ 1.25
TOP3A-220ENST00000585031 PTPRFP10586 1907 aa22.87■■□□□ 1.25
TOP3A-220ENST00000585031 VPS37DQ86XT2 251 aa22.87■■□□□ 1.25
TOP3A-220ENST00000585031 DEFB123Q8N688 67 aa22.87■■□□□ 1.25
TOP3A-220ENST00000585031 C9orf78Q9NZ63 289 aaPredicted RBP22.87■■□□□ 1.25
TOP3A-220ENST00000585031 TMOD2Q9NZR1 351 aa22.87■■□□□ 1.25
TOP3A-220ENST00000585031 MYH13Q9UKX3 1938 aa22.86■■□□□ 1.25
TOP3A-220ENST00000585031 NBPF7P0C2Y1 421 aaPredicted RBP22.86■■□□□ 1.25
TOP3A-220ENST00000585031 NFIAQ12857 509 aa22.86■■□□□ 1.25
TOP3A-220ENST00000585031 HHIPL2Q6UWX4 724 aa22.86■■□□□ 1.25
TOP3A-220ENST00000585031 ZFPM1Q8IX07 1006 aa22.86■■□□□ 1.25
TOP3A-220ENST00000585031 FAM151AQ8WW52 585 aa22.86■■□□□ 1.25
TOP3A-220ENST00000585031 MROH5Q6ZUA9 1318 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 ADCY3O60266 1144 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 FCGRTP55899 365 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 TCP10Q12799 353 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 CRISPLD2Q9H0B8 497 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 PHIPQ8WWQ0 1821 aa22.85■■□□□ 1.25
TOP3A-220ENST00000585031 LAMA2P24043 3122 aaKnown RBP22.84■■□□□ 1.25
TOP3A-220ENST00000585031 FRAT2O75474 233 aaPredicted RBP22.84■■□□□ 1.25
TOP3A-220ENST00000585031 TFRCP02786 760 aaKnown RBP22.84■■□□□ 1.25
TOP3A-220ENST00000585031 INHAP05111 366 aa22.84■■□□□ 1.25
TOP3A-220ENST00000585031 FLT3LGP49771 235 aa22.84■■□□□ 1.25
TOP3A-220ENST00000585031 NOL9Q5SY16 702 aaKnown RBP22.84■■□□□ 1.25
TOP3A-220ENST00000585031 CDC42EP5Q6NZY7 148 aa22.84■■□□□ 1.25
TOP3A-220ENST00000585031 MTMR10Q9NXD2 777 aa22.84■■□□□ 1.25
TOP3A-220ENST00000585031 FAM198AQ9UFP1 575 aa22.84■■□□□ 1.25
TOP3A-220ENST00000585031 SLURP2P0DP57 97 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 LRIT3Q3SXY7 679 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 Q7L0L9 218 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 ANKRD44Q8N8A2 993 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 KLHDC4Q8TBB5 520 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 PXYLP1Q8TE99 480 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 DIS3LQ8TF46 1054 aaKnown RBP22.83■■□□□ 1.25
TOP3A-220ENST00000585031 DEFB118Q96PH6 123 aa22.83■■□□□ 1.25
TOP3A-220ENST00000585031 COL25A1Q9BXS0 654 aaPredicted RBP22.83■■□□□ 1.25
TOP3A-220ENST00000585031 BICC1Q9H694 974 aaKnown RBP22.83■■□□□ 1.25
TOP3A-220ENST00000585031 SPINK5Q9NQ38 1064 aaPredicted RBP22.83■■□□□ 1.25
TOP3A-220ENST00000585031 PAK6Q9NQU5 681 aaPredicted RBP22.83■■□□□ 1.25
TOP3A-220ENST00000585031 ALDH1L1O75891 902 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 PDE8BO95263 885 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 DIXDC1Q155Q3 683 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 CAVIN4Q5BKX8 364 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 METTL24Q5JXM2 366 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 PAWRQ96IZ0 340 aaKnown RBP22.82■■□□□ 1.24
TOP3A-220ENST00000585031 PARK7Q99497 189 aaKnown RBP22.82■■□□□ 1.24
TOP3A-220ENST00000585031 DAGLAQ9Y4D2 1042 aa22.82■■□□□ 1.24
TOP3A-220ENST00000585031 ATRNL1Q5VV63 1379 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms