RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 SREBF2Q12772 1141 aa20.6■□□□□ 0.89
CSNK1D-225ENST00000584913 TMED8Q6PL24 325 aaPredicted RBP20.6■□□□□ 0.89
CSNK1D-225ENST00000584913 CSRNP1Q96S65 589 aa20.6■□□□□ 0.89
CSNK1D-225ENST00000584913 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
CSNK1D-225ENST00000584913 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 TCP10L2B9ZVM9 353 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 USP2O75604 605 aaPredicted RBP20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 TM4SF4P48230 202 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 INHBEP58166 350 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 ERICH6Q7L0X2 663 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 DZIP1Q86YF9 867 aaKnown RBP20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 FAM151AQ8WW52 585 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 ZIC5Q96T25 663 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 CFHR5Q9BXR6 569 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 IDI2Q9BXS1 227 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 AKAP11Q9UKA4 1901 aa20.59■□□□□ 0.89
CSNK1D-225ENST00000584913 OTOFQ9HC10 1997 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 GSTO1P78417 241 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 DIXDC1Q155Q3 683 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 TMEM39BQ9GZU3 492 aa20.58■□□□□ 0.89
CSNK1D-225ENST00000584913 MROH7-TTC4A0A0A0MT08 1334 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 MYH2Q9UKX2 1941 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 MANSC4A6NHS7 340 aaPredicted RBP20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 LDHCP07864 332 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 MCAMP43121 646 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 NOM1Q5C9Z4 860 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 CDC42EP5Q6NZY7 148 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 ABCF2Q9UG63 623 aa20.57■□□□□ 0.88
CSNK1D-225ENST00000584913 ENTPD3O75355 529 aa20.56■□□□□ 0.88
CSNK1D-225ENST00000584913 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
CSNK1D-225ENST00000584913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.56■□□□□ 0.88
CSNK1D-225ENST00000584913 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
CSNK1D-225ENST00000584913 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-225ENST00000584913 GPR75-ASB3A0A0A6YYF3 556 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 MECOMQ03112 1051 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 PRKG1Q13976 671 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 NSUN4Q96CB9 384 aaKnown RBP20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 KIF1BPQ96EK5 621 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 WNK4Q96J92 1243 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 DBNLQ9UJU6 430 aaKnown RBP20.55■□□□□ 0.88
CSNK1D-225ENST00000584913 EAF2Q96CJ1 260 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-225ENST00000584913 USP40Q9NVE5 1235 aa20.54■□□□□ 0.88
CSNK1D-225ENST00000584913 CACNB3P54284 484 aa20.53■□□□□ 0.88
CSNK1D-225ENST00000584913 MAP3K9P80192 1104 aa20.53■□□□□ 0.88
CSNK1D-225ENST00000584913 RHPN1Q8TCX5 695 aa20.53■□□□□ 0.88
CSNK1D-225ENST00000584913 CSADQ9Y600 493 aa20.53■□□□□ 0.88
CSNK1D-225ENST00000584913 CERS3Q8IU89 383 aa20.52■□□□□ 0.88
CSNK1D-225ENST00000584913 SIRT2Q8IXJ6 389 aa20.52■□□□□ 0.88
CSNK1D-225ENST00000584913 ZNF341Q9BYN7 854 aa20.52■□□□□ 0.88
CSNK1D-225ENST00000584913 FAM198AQ9UFP1 575 aa20.52■□□□□ 0.88
CSNK1D-225ENST00000584913 EXOC6BQ9Y2D4 811 aa20.52■□□□□ 0.88
CSNK1D-225ENST00000584913 DOCK2Q92608 1830 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 ATRNL1Q5VV63 1379 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 BTDP43251 543 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 PI16Q6UXB8 463 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 CDAN1Q8IWY9 1227 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 ZNF384Q8TF68 577 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 CLMNQ96JQ2 1002 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 LRP2BPQ9P2M1 347 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 ZNF112Q9UJU3 913 aa20.51■□□□□ 0.87
CSNK1D-225ENST00000584913 WDHD1O75717 1129 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 TRPA1O75762 1119 aa20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 NFIAQ12857 509 aa20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 VGLL4Q14135 290 aa20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 RAI14Q9P0K7 980 aa20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 FZD1Q9UP38 647 aa20.5■□□□□ 0.87
CSNK1D-225ENST00000584913 SPDYE5A6NIY4 337 aa20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 PLCG2P16885 1265 aa20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 RHBDL3P58872 404 aa20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 MAP3K10Q02779 954 aa20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
CSNK1D-225ENST00000584913 BAG3O95817 575 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 RGS3P49796 1198 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 AACSQ86V21 672 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 OPTNQ96CV9 577 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 WRNIP1Q96S55 665 aa20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 NOL10Q9BSC4 688 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 CCDC8Q9H0W5 538 aaPredicted RBP20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-225ENST00000584913 PPP4CP60510 307 aa20.47■□□□□ 0.87
CSNK1D-225ENST00000584913 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
CSNK1D-225ENST00000584913 ERO1BQ86YB8 467 aa20.47■□□□□ 0.87
CSNK1D-225ENST00000584913 ZCCHC17Q9NP64 241 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-225ENST00000584913 SNCAIPQ9Y6H5 919 aa20.47■□□□□ 0.87
CSNK1D-225ENST00000584913 GJA5P36382 358 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms