RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, human

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD2-210	ENST00000584400	IREB2	P48200	963 aa	Known RBP	33.27	■■■□□ 2.92
SMARCD2-210	ENST00000584400	CTCF	P49711	727 aa	Predicted RBP	33.27	■■■□□ 2.92
SMARCD2-210	ENST00000584400	RASAL3	Q86YV0	1011 aa		33.27	■■■□□ 2.92
SMARCD2-210	ENST00000584400	LRP2BP	Q9P2M1	347 aa		33.27	■■■□□ 2.92
SMARCD2-210	ENST00000584400	GAK	O14976	1311 aa		33.27	■■■□□ 2.92
SMARCD2-210	ENST00000584400	CA12	O43570	354 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	CACNB3	P54284	484 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	LDLRAD1	Q5T700	205 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	CDC42EP5	Q6NZY7	148 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	PI16	Q6UXB8	463 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	TMEM39B	Q9GZU3	492 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	USP40	Q9NVE5	1235 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	RAI14	Q9P0K7	980 aa		33.26	■■■□□ 2.91
SMARCD2-210	ENST00000584400	MECOM	Q03112	1051 aa		33.25	■■■□□ 2.91
SMARCD2-210	ENST00000584400	TEPSIN	Q96N21	525 aa		33.25	■■■□□ 2.91
SMARCD2-210	ENST00000584400	IL1RAPL2	Q9NP60	686 aa		33.25	■■■□□ 2.91
SMARCD2-210	ENST00000584400	APBB1	O00213	710 aa		33.24	■■■□□ 2.91
SMARCD2-210	ENST00000584400	FOXN1	O15353	648 aa		33.24	■■■□□ 2.91
SMARCD2-210	ENST00000584400	TBC1D9	Q6ZT07	1266 aa		33.24	■■■□□ 2.91
SMARCD2-210	ENST00000584400	KIF23	Q02241	960 aa	Predicted RBP	33.23	■■■□□ 2.91
SMARCD2-210	ENST00000584400	TLR7	Q9NYK1	1049 aa	Known RBP	33.23	■■■□□ 2.91
SMARCD2-210	ENST00000584400	MROH7-TTC4	A0A0A0MT08	1334 aa		33.23	■■■□□ 2.91
SMARCD2-210	ENST00000584400	IFIT2	P09913	472 aa	Known RBP	33.22	■■■□□ 2.91
SMARCD2-210	ENST00000584400	FAM151A	Q8WW52	585 aa		33.22	■■■□□ 2.91
SMARCD2-210	ENST00000584400	SLC10A4	Q96EP9	437 aa		33.22	■■■□□ 2.91
SMARCD2-210	ENST00000584400	SNRK	Q9NRH2	765 aa		33.22	■■■□□ 2.91
SMARCD2-210	ENST00000584400	RPAP1	Q9BWH6	1393 aa	Predicted RBP	33.21	■■■□□ 2.91
SMARCD2-210	ENST00000584400	SSC5D	A1L4H1	1573 aa		33.21	■■■□□ 2.91
SMARCD2-210	ENST00000584400	ANKRD13A	Q8IZ07	590 aa		33.21	■■■□□ 2.91
SMARCD2-210	ENST00000584400	NSUN4	Q96CB9	384 aa	Known RBP	33.21	■■■□□ 2.91
SMARCD2-210	ENST00000584400	USP2	O75604	605 aa	Predicted RBP	33.2	■■■□□ 2.91
SMARCD2-210	ENST00000584400	MAP4K4	O95819	1239 aa	Predicted RBP	33.2	■■■□□ 2.91
SMARCD2-210	ENST00000584400	BTD	P43251	543 aa		33.19	■■■□□ 2.9
SMARCD2-210	ENST00000584400	ZIC5	Q96T25	663 aa		33.19	■■■□□ 2.9
SMARCD2-210	ENST00000584400	NOL10	Q9BSC4	688 aa	Known RBP	33.19	■■■□□ 2.9
SMARCD2-210	ENST00000584400	FZD1	Q9UP38	647 aa		33.19	■■■□□ 2.9
SMARCD2-210	ENST00000584400	GPR75-ASB3	A0A0A6YYF3	556 aa		33.18	■■■□□ 2.9
SMARCD2-210	ENST00000584400	CYP2E1	P05181	493 aa	Predicted RBP	33.18	■■■□□ 2.9
SMARCD2-210	ENST00000584400	ZAP70	P43403	619 aa		33.18	■■■□□ 2.9
SMARCD2-210	ENST00000584400	DCAF15	Q66K64	600 aa		33.18	■■■□□ 2.9
SMARCD2-210	ENST00000584400	IDI2	Q9BXS1	227 aa		33.18	■■■□□ 2.9
SMARCD2-210	ENST00000584400	TCP10	Q12799	353 aa		33.17	■■■□□ 2.9
SMARCD2-210	ENST00000584400	LRRCC1	Q9C099	1032 aa		33.17	■■■□□ 2.9
SMARCD2-210	ENST00000584400	PRDM10	Q9NQV6	1147 aa		33.17	■■■□□ 2.9
SMARCD2-210	ENST00000584400	ENTPD3	O75355	529 aa		33.16	■■■□□ 2.9
SMARCD2-210	ENST00000584400	NAA16	Q6N069	864 aa	Predicted RBP	33.16	■■■□□ 2.9
SMARCD2-210	ENST00000584400	NFIA	Q12857	509 aa		33.15	■■■□□ 2.9
SMARCD2-210	ENST00000584400	CDAN1	Q8IWY9	1227 aa		33.15	■■■□□ 2.9
SMARCD2-210	ENST00000584400	CSRNP1	Q96S65	589 aa		33.15	■■■□□ 2.9
SMARCD2-210	ENST00000584400	BAG3	O95817	575 aa		33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	ZBTB48	P10074	688 aa	Predicted RBP	33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	MAP3K9	P80192	1104 aa		33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	TMED8	Q6PL24	325 aa	Predicted RBP	33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	SAGE1	Q9NXZ1	904 aa		33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	FAM198A	Q9UFP1	575 aa		33.14	■■■□□ 2.9
SMARCD2-210	ENST00000584400	HSPA8	P11142	646 aa	Known RBP	33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	LBX1	P52954	281 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	SREBF2	Q12772	1141 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	SPRYD7	Q5W111	196 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	ZNF384	Q8TF68	577 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	BCL11A	Q9H165	835 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	DCTPP1	Q9H773	170 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	CSAD	Q9Y600	493 aa		33.13	■■■□□ 2.89
SMARCD2-210	ENST00000584400	RGS3	P49796	1198 aa		33.12	■■■□□ 2.89
SMARCD2-210	ENST00000584400	TTF1	Q15361	905 aa	Predicted RBP	33.12	■■■□□ 2.89
SMARCD2-210	ENST00000584400	PCNT	O95613	3336 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	PLCG2	P16885	1265 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	AAMP	Q13685	434 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	CLMN	Q96JQ2	1002 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	CRBN	Q96SW2	442 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	ZNF341	Q9BYN7	854 aa		33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.11	■■■□□ 2.89
SMARCD2-210	ENST00000584400	NPM3	O75607	178 aa	Known RBP	33.1	■■■□□ 2.89
SMARCD2-210	ENST00000584400	INHBE	P58166	350 aa		33.1	■■■□□ 2.89
SMARCD2-210	ENST00000584400	MAP3K12	Q12852	859 aa		33.1	■■■□□ 2.89
SMARCD2-210	ENST00000584400	PIH1D3	Q9NQM4	214 aa	Known RBP	33.1	■■■□□ 2.89
SMARCD2-210	ENST00000584400	WDHD1	O75717	1129 aa	Predicted RBP	33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	IDH1	O75874	414 aa	Known RBP	33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	RHBDL3	P58872	404 aa		33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	MKRN3	Q13064	507 aa	Known RBP	33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	WNK4	Q96J92	1243 aa		33.09	■■■□□ 2.89
SMARCD2-210	ENST00000584400	MYH2	Q9UKX2	1941 aa		33.08	■■■□□ 2.89
SMARCD2-210	ENST00000584400	MANSC4	A6NHS7	340 aa	Predicted RBP	33.08	■■■□□ 2.89
SMARCD2-210	ENST00000584400	TM4SF4	P48230	202 aa		33.08	■■■□□ 2.89
SMARCD2-210	ENST00000584400	CERS3	Q8IU89	383 aa		33.08	■■■□□ 2.89
SMARCD2-210	ENST00000584400	WRNIP1	Q96S55	665 aa		33.08	■■■□□ 2.89
SMARCD2-210	ENST00000584400	PICALM	Q13492	652 aa		33.07	■■■□□ 2.88
SMARCD2-210	ENST00000584400	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	33.07	■■■□□ 2.88
SMARCD2-210	ENST00000584400	RNF186	Q9NXI6	227 aa		33.07	■■■□□ 2.88
SMARCD2-210	ENST00000584400	PCDHB15	Q9Y5E8	787 aa		33.07	■■■□□ 2.88
SMARCD2-210	ENST00000584400	RFX7	Q2KHR2	1363 aa		33.07	■■■□□ 2.88
SMARCD2-210	ENST00000584400	PPP4C	P60510	307 aa		33.06	■■■□□ 2.88
SMARCD2-210	ENST00000584400	VGLL4	Q14135	290 aa		33.06	■■■□□ 2.88
SMARCD2-210	ENST00000584400	MIGA2	Q7L4E1	593 aa		33.06	■■■□□ 2.88
SMARCD2-210	ENST00000584400	ELP3	Q9H9T3	547 aa		33.06	■■■□□ 2.88
SMARCD2-210	ENST00000584400	TEX11	Q8IYF3	940 aa		33.05	■■■□□ 2.88

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