RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 ZNF157P51786 506 aaPredicted RBP30.46■■■□□ 2.47
TTC39C-209ENST00000584250 NFIAQ12857 509 aa30.46■■■□□ 2.47
TTC39C-209ENST00000584250 TNFAIP1Q13829 316 aa30.46■■■□□ 2.47
TTC39C-209ENST00000584250 CLASRPQ8N2M8 674 aaKnown RBP30.46■■■□□ 2.47
TTC39C-209ENST00000584250 NSUN4Q96CB9 384 aaKnown RBP30.46■■■□□ 2.47
TTC39C-209ENST00000584250 PIH1D3Q9NQM4 214 aaKnown RBP30.46■■■□□ 2.47
TTC39C-209ENST00000584250 ANGEL1Q9UNK9 670 aaKnown RBP30.46■■■□□ 2.47
TTC39C-209ENST00000584250 USP40Q9NVE5 1235 aa30.45■■■□□ 2.47
TTC39C-209ENST00000584250 RAI14Q9P0K7 980 aa30.45■■■□□ 2.47
TTC39C-209ENST00000584250 SUPT16HQ9Y5B9 1047 aaKnown RBP30.45■■■□□ 2.47
TTC39C-209ENST00000584250 DCTPP1Q9H773 170 aa30.44■■■□□ 2.46
TTC39C-209ENST00000584250 LRP2BPQ9P2M1 347 aa30.44■■■□□ 2.46
TTC39C-209ENST00000584250 MROH7-TTC4A0A0A0MT08 1334 aa30.44■■■□□ 2.46
TTC39C-209ENST00000584250 RASAL3Q86YV0 1011 aa30.43■■■□□ 2.46
TTC39C-209ENST00000584250 FAM163AQ96GL9 167 aaPredicted RBP30.43■■■□□ 2.46
TTC39C-209ENST00000584250 ANTXR1Q9H6X2 564 aa30.43■■■□□ 2.46
TTC39C-209ENST00000584250 TMOD2Q9NZR1 351 aa30.43■■■□□ 2.46
TTC39C-209ENST00000584250 BTDP43251 543 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 TNNI2P48788 182 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 TCP10Q12799 353 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 SUPT20HL1Q3ZLR7 823 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 ZFPM1Q8IX07 1006 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 WBP1LQ9NX94 342 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 FAM198AQ9UFP1 575 aa30.42■■■□□ 2.46
TTC39C-209ENST00000584250 USP2O75604 605 aaPredicted RBP30.41■■■□□ 2.46
TTC39C-209ENST00000584250 SLC10A3P09131 477 aa30.41■■■□□ 2.46
TTC39C-209ENST00000584250 IFIT2P09913 472 aaKnown RBP30.41■■■□□ 2.46
TTC39C-209ENST00000584250 LDLRAD1Q5T700 205 aa30.41■■■□□ 2.46
TTC39C-209ENST00000584250 FKBP1CQ5VVH2 108 aa30.41■■■□□ 2.46
TTC39C-209ENST00000584250 ARMC9Q7Z3E5 817 aa30.41■■■□□ 2.46
TTC39C-209ENST00000584250 LRRCC1Q9C099 1032 aa30.41■■■□□ 2.46
TTC39C-209ENST00000584250 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.41■■■□□ 2.46
TTC39C-209ENST00000584250 FAM83AQ86UY5 434 aa30.4■■■□□ 2.46
TTC39C-209ENST00000584250 CLMNQ96JQ2 1002 aa30.4■■■□□ 2.46
TTC39C-209ENST00000584250 GPR75-ASB3A0A0A6YYF3 556 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 FOXN1O15353 648 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 MAP2K2P36507 400 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 RHBDL3P58872 404 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 MAP3K11Q16584 847 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 ADGRA1Q86SQ6 560 aa30.39■■■□□ 2.46
TTC39C-209ENST00000584250 NOGQ13253 232 aa30.38■■■□□ 2.45
TTC39C-209ENST00000584250 EXOC6Q8TAG9 804 aa30.38■■■□□ 2.45
TTC39C-209ENST00000584250 CCDC102AQ96A19 550 aa30.38■■■□□ 2.45
TTC39C-209ENST00000584250 DDX4Q9NQI0 724 aaKnown RBP30.38■■■□□ 2.45
TTC39C-209ENST00000584250 RFX7Q2KHR2 1363 aa30.38■■■□□ 2.45
TTC39C-209ENST00000584250 MAST2Q6P0Q8 1798 aa30.38■■■□□ 2.45
TTC39C-209ENST00000584250 OTOFQ9HC10 1997 aa30.37■■■□□ 2.45
TTC39C-209ENST00000584250 PPP1R12BO60237 982 aaPredicted RBP30.37■■■□□ 2.45
TTC39C-209ENST00000584250 WDHD1O75717 1129 aaPredicted RBP30.37■■■□□ 2.45
TTC39C-209ENST00000584250 KIF23Q02241 960 aaPredicted RBP30.37■■■□□ 2.45
TTC39C-209ENST00000584250 SLF2Q8IX21 1173 aa30.37■■■□□ 2.45
TTC39C-209ENST00000584250 RGS3P49796 1198 aa30.36■■■□□ 2.45
TTC39C-209ENST00000584250 MKRN3Q13064 507 aaKnown RBP30.36■■■□□ 2.45
TTC39C-209ENST00000584250 FAM151AQ8WW52 585 aa30.36■■■□□ 2.45
TTC39C-209ENST00000584250 EDC3Q96F86 508 aaKnown RBP30.36■■■□□ 2.45
TTC39C-209ENST00000584250 GSTO1P78417 241 aa30.35■■■□□ 2.45
TTC39C-209ENST00000584250 NAA16Q6N069 864 aaPredicted RBP30.35■■■□□ 2.45
TTC39C-209ENST00000584250 DOCK2Q92608 1830 aa30.34■■■□□ 2.45
TTC39C-209ENST00000584250 IDH1O75874 414 aaKnown RBP30.34■■■□□ 2.45
TTC39C-209ENST00000584250 LDHCP07864 332 aa30.34■■■□□ 2.45
TTC39C-209ENST00000584250 MAP2K1Q02750 393 aaPredicted RBP30.34■■■□□ 2.45
TTC39C-209ENST00000584250 IDI2Q9BXS1 227 aa30.34■■■□□ 2.45
TTC39C-209ENST00000584250 AK9Q5TCS8 1911 aa30.34■■■□□ 2.45
TTC39C-209ENST00000584250 RPAP1Q9BWH6 1393 aaPredicted RBP30.33■■■□□ 2.45
TTC39C-209ENST00000584250 SLURP2P0DP57 97 aa30.33■■■□□ 2.45
TTC39C-209ENST00000584250 SH3BP5LQ7L8J4 393 aa30.33■■■□□ 2.45
TTC39C-209ENST00000584250 DNAJC2Q99543 621 aaKnown RBP30.33■■■□□ 2.45
TTC39C-209ENST00000584250 PICALMQ13492 652 aa30.32■■■□□ 2.44
TTC39C-209ENST00000584250 MIGA2Q7L4E1 593 aa30.32■■■□□ 2.44
TTC39C-209ENST00000584250 BOLA2Q9H3K6 86 aa30.32■■■□□ 2.44
TTC39C-209ENST00000584250 TSKSQ9UJT2 592 aa30.32■■■□□ 2.44
TTC39C-209ENST00000584250 IREB2P48200 963 aaKnown RBP30.31■■■□□ 2.44
TTC39C-209ENST00000584250 IRX6P78412 446 aaPredicted RBP30.31■■■□□ 2.44
TTC39C-209ENST00000584250 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.31■■■□□ 2.44
TTC39C-209ENST00000584250 SH3RF3Q8TEJ3 882 aaPredicted RBP30.31■■■□□ 2.44
TTC39C-209ENST00000584250 CSRNP1Q96S65 589 aa30.31■■■□□ 2.44
TTC39C-209ENST00000584250 AATFQ9NY61 560 aaKnown RBP eCLIP30.31■■■□□ 2.44
TTC39C-209ENST00000584250 GOLIM4O00461 696 aa30.3■■■□□ 2.44
TTC39C-209ENST00000584250 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.3■■■□□ 2.44
TTC39C-209ENST00000584250 DDTLA6NHG4 134 aaPredicted RBP30.29■■■□□ 2.44
TTC39C-209ENST00000584250 ENTPD3O75355 529 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 ATP5JP18859 108 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 CYP7A1P22680 504 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 GJA5P36382 358 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 DYNLL1P63167 89 aaKnown RBP30.29■■■□□ 2.44
TTC39C-209ENST00000584250 TSHZ3Q63HK5 1081 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 MAGEB6Q8N7X4 407 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.29■■■□□ 2.44
TTC39C-209ENST00000584250 AIDAQ96BJ3 306 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 SLC10A4Q96EP9 437 aa30.29■■■□□ 2.44
TTC39C-209ENST00000584250 SPRYD7Q5W111 196 aa30.28■■■□□ 2.44
TTC39C-209ENST00000584250 OTUD7AQ8TE49 926 aaPredicted RBP30.28■■■□□ 2.44
TTC39C-209ENST00000584250 CNKSR2Q8WXI2 1034 aa30.28■■■□□ 2.44
TTC39C-209ENST00000584250 ELP3Q9H9T3 547 aa30.28■■■□□ 2.44
TTC39C-209ENST00000584250 ANKRD13AQ8IZ07 590 aa30.27■■■□□ 2.44
TTC39C-209ENST00000584250 CDK5RAP2Q96SN8 1893 aa30.27■■■□□ 2.44
TTC39C-209ENST00000584250 ATRNL1Q5VV63 1379 aa30.27■■■□□ 2.44
TTC39C-209ENST00000584250 HSPA8P11142 646 aaKnown RBP30.26■■■□□ 2.43
TTC39C-209ENST00000584250 VGLL4Q14135 290 aa30.26■■■□□ 2.43
TTC39C-209ENST00000584250 SLFNL1Q499Z3 407 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms