RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
COPS3-218ENST00000584216 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.79■□□□□ 0.28
COPS3-218ENST00000584216 PARK7Q99497 189 aaKnown RBP16.79■□□□□ 0.28
COPS3-218ENST00000584216 CPA4Q9UI42 421 aa16.79■□□□□ 0.28
COPS3-218ENST00000584216 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
COPS3-218ENST00000584216 MYPNQ86TC9 1320 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 GJB1P08034 283 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
COPS3-218ENST00000584216 CAPN2P17655 700 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 OSBPP22059 807 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 GJA8P48165 433 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 SHISA4Q96DD7 197 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 BIN2Q9UBW5 565 aaPredicted RBP16.78■□□□□ 0.28
COPS3-218ENST00000584216 KCNH4Q9UQ05 1017 aa16.78■□□□□ 0.28
COPS3-218ENST00000584216 UTYO14607 1347 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
COPS3-218ENST00000584216 FCGRTP55899 365 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 MTFR1Q15390 333 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
COPS3-218ENST00000584216 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.28
COPS3-218ENST00000584216 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.28
COPS3-218ENST00000584216 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.28
COPS3-218ENST00000584216 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
COPS3-218ENST00000584216 CCL5P13501 91 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 INPP5BP32019 993 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 BCAMP50895 628 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 KAZALD1Q96I82 304 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
COPS3-218ENST00000584216 ZNF112Q9UJU3 913 aa16.76■□□□□ 0.27
COPS3-218ENST00000584216 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
COPS3-218ENST00000584216 ADGRA2Q96PE1 1338 aa16.75■□□□□ 0.27
COPS3-218ENST00000584216 CXCL11O14625 94 aa16.75■□□□□ 0.27
COPS3-218ENST00000584216 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
COPS3-218ENST00000584216 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
COPS3-218ENST00000584216 NOL9Q5SY16 702 aaKnown RBP16.75■□□□□ 0.27
COPS3-218ENST00000584216 SLC5A1P13866 664 aa16.74■□□□□ 0.27
COPS3-218ENST00000584216 FASTKD5Q7L8L6 764 aaKnown RBP16.74■□□□□ 0.27
COPS3-218ENST00000584216 UBE2Q1Q7Z7E8 422 aa16.74■□□□□ 0.27
COPS3-218ENST00000584216 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
COPS3-218ENST00000584216 A0A1W2PPC1 479 aa16.73■□□□□ 0.27
COPS3-218ENST00000584216 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
COPS3-218ENST00000584216 CTGFP29279 349 aa16.73■□□□□ 0.27
COPS3-218ENST00000584216 PRKCZQ05513 592 aa16.73■□□□□ 0.27
COPS3-218ENST00000584216 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
COPS3-218ENST00000584216 LPIN2Q92539 896 aa16.73■□□□□ 0.27
COPS3-218ENST00000584216 BCRP11274 1271 aa16.72■□□□□ 0.27
COPS3-218ENST00000584216 TCP10Q12799 353 aa16.72■□□□□ 0.27
COPS3-218ENST00000584216 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
COPS3-218ENST00000584216 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
COPS3-218ENST00000584216 FGFR2P21802 821 aa16.71■□□□□ 0.27
COPS3-218ENST00000584216 CDC42EP5Q6NZY7 148 aa16.71■□□□□ 0.27
COPS3-218ENST00000584216 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
COPS3-218ENST00000584216 SLC45A1Q9Y2W3 748 aa16.71■□□□□ 0.27
COPS3-218ENST00000584216 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
COPS3-218ENST00000584216 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
COPS3-218ENST00000584216 SGPL1O95470 568 aa16.7■□□□□ 0.26
COPS3-218ENST00000584216 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
COPS3-218ENST00000584216 MOGSQ13724 837 aa16.7■□□□□ 0.26
COPS3-218ENST00000584216 PXYLP1Q8TE99 480 aa16.7■□□□□ 0.26
COPS3-218ENST00000584216 PTPRCP08575 1304 aa16.7■□□□□ 0.26
COPS3-218ENST00000584216 EYA2O00167 538 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
COPS3-218ENST00000584216 ADCY3O60266 1144 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 EVI5O60447 810 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 CYP2C8P10632 490 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 GPAT2Q6NUI2 795 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 SMCR8Q8TEV9 937 aaPredicted RBP16.69■□□□□ 0.26
COPS3-218ENST00000584216 PRO3102Q9H379 93 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
COPS3-218ENST00000584216 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 ZHX2Q9Y6X8 837 aa16.69■□□□□ 0.26
COPS3-218ENST00000584216 A0A0G2JLL6 359 aaPredicted RBP16.68■□□□□ 0.26
COPS3-218ENST00000584216 NFIAQ12857 509 aa16.68■□□□□ 0.26
COPS3-218ENST00000584216 IRF5Q13568 498 aa16.68■□□□□ 0.26
COPS3-218ENST00000584216 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
COPS3-218ENST00000584216 PRRT2Q7Z6L0 340 aaPredicted RBP16.68■□□□□ 0.26
COPS3-218ENST00000584216 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
COPS3-218ENST00000584216 UNC93B1Q9H1C4 597 aa16.68■□□□□ 0.26
COPS3-218ENST00000584216 TRIOBPQ9H2D6 2365 aa16.68■□□□□ 0.26
COPS3-218ENST00000584216 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
COPS3-218ENST00000584216 SEMA3EO15041 775 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 ENTPD3O75355 529 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
COPS3-218ENST00000584216 PRDX5P30044 214 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 FLT3LGP49771 235 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 GABRQQ9UN88 632 aa16.67■□□□□ 0.26
COPS3-218ENST00000584216 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms