RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-229	ENST00000583697	TNRC18	O15417	2968 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SALL1	Q9NSC2	1324 aa		10.82	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	DOCK1	Q14185	1865 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ARHGEF6	Q15052	776 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	DIXDC1	Q155Q3	683 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PRPF38B	Q5VTL8	546 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	INTS3	Q68E01	1043 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ERO1B	Q86YB8	467 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	DZIP1	Q86YF9	867 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	POTED	Q86YR6	584 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	FAM151A	Q8WW52	585 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	BRI3BP	Q8WY22	251 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	MS4A4A	Q96JQ5	239 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	MEIS3	Q99687	375 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PTPN18	Q99952	460 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	EFCC1	Q9HA90	598 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PTPN22	Q9Y2R2	807 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	DAGLA	Q9Y4D2	1042 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ZSWIM8	A7E2V4	1837 aa		10.81	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SLC34A2	O95436	690 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	GNAI3	P08754	354 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	CETP	P11597	493 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PHKA1	P46020	1223 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	TCP10	Q12799	353 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PPIL2	Q13356	520 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SNAPC2	Q13487	334 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ZCCHC17	Q9NP64	241 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	COPRS	Q9NQ92	184 aa		10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PA2G4	Q9UQ80	394 aa	Known RBP	10.8	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	IRF6	O14896	467 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SRGAP3	O43295	1099 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	RARS	P54136	660 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PPAT	Q06203	517 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	MVP	Q14764	893 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	KIF22	Q14807	665 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	CCDC102B	Q68D86	513 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	CDC42EP5	Q6NZY7	148 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	MIGA2	Q7L4E1	593 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SLF2	Q8IX21	1173 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	FAM43A	Q8N2R8	423 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ABCF2	Q9UG63	623 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	HTT	P42858	3142 aa		10.79	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697		A0A1B0GUL7	405 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	IPO8	O15397	1037 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ADORA1	P30542	326 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	NFIA	Q12857	509 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	SLC9C1	Q4G0N8	1177 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ARHGAP45	Q92619	1136 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	FRAT1	Q92837	279 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	USP40	Q9NVE5	1235 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	AKAP2	Q9Y2D5	859 aa		10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	PDS5A	Q29RF7	1337 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	RFX7	Q2KHR2	1363 aa		10.77	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	ATAD5	Q96QE3	1844 aa		10.77	□□□□□ -0.68
CDK5RAP3-229	ENST00000583697	BTBD19	C9JJ37	291 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	TLR2	O60603	784 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	INPP5B	P32019	993 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	RASGRF1	Q13972	1273 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	NBPF11	Q86T75	865 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	CENPF	P49454	3210 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	GAK	O14976	1311 aa		10.77	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	BRCA2	P51587	3418 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	POTEF	A5A3E0	1075 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ZBTB22	O15209	634 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ENTPD3	O75355	529 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	GNAI2	P04899	355 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	TRIM27	P14373	513 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	BTD	P43251	543 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	RGS3	P49796	1198 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	TFCP2	Q12800	502 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PICALM	Q13492	652 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	MTX1	Q13505	466 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	NOL9	Q5SY16	702 aa	Known RBP	10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	GORAB	Q5T7V8	394 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ARMC5	Q96C12	935 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	XAGE2	Q96GT9	111 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	TMEM106C	Q9BVX2	250 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	FAM198A	Q9UFP1	575 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PTCH2	Q9Y6C5	1203 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	MROH7-TTC4	A0A0A0MT08	1334 aa		10.76	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	TIMM10	P62072	90 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	LACTB	P83111	547 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ATF7IP	Q6VMQ6	1270 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ERICH6	Q7L0X2	663 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ANKRD23	Q86SG2	305 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	NEUROD6	Q96NK8	337 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PARK7	Q99497	189 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	IDI2	Q9BXS1	227 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PICK1	Q9NRD5	415 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PTPRF	P10586	1907 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ATRNL1	Q5VV63	1379 aa		10.75	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	MGAM	O43451	1857 aa		10.74	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PDHX	O00330	501 aa		10.74	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	ECM2	O94769	699 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	GNRH1	P01148	92 aa		10.74	□□□□□ -0.69
CDK5RAP3-229	ENST00000583697	PRMT2	P55345	433 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms