RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF341Q9BYN7 854 aa20.29■□□□□ 0.84
SREBF1-221ENST00000583080 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
SREBF1-221ENST00000583080 ZNF521Q96K83 1311 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 CEP290O15078 2479 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 WDHD1O75717 1129 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-221ENST00000583080 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
SREBF1-221ENST00000583080 KIF22Q14807 665 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 DCAF15Q66K64 600 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 CPA4Q9UI42 421 aa20.28■□□□□ 0.84
SREBF1-221ENST00000583080 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-221ENST00000583080 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 RFX5P48382 616 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-221ENST00000583080 PPATQ06203 517 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 DIXDC1Q155Q3 683 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 C17orf99Q6UX52 265 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 SHISA4Q96DD7 197 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
SREBF1-221ENST00000583080 TCP10Q12799 353 aa20.26■□□□□ 0.83
SREBF1-221ENST00000583080 NFIAQ12857 509 aa20.26■□□□□ 0.83
SREBF1-221ENST00000583080 MTFR1Q15390 333 aa20.26■□□□□ 0.83
SREBF1-221ENST00000583080 PTPRCP08575 1304 aa20.26■□□□□ 0.83
SREBF1-221ENST00000583080 H0YGN5 161 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 EYA2O00167 538 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 MOGSQ13724 837 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 CDC42EP5Q6NZY7 148 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 ANKRD23Q86SG2 305 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 FAM151AQ8WW52 585 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 TRIM47Q96LD4 638 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 TRIOBPQ9H2D6 2365 aa20.25■□□□□ 0.83
SREBF1-221ENST00000583080 PDHXO00330 501 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 GNRH1P01148 92 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 SLC5A1P13866 664 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 PRDX5P30044 214 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 PSMC4P43686 418 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 ZNF112Q9UJU3 913 aa20.24■□□□□ 0.83
SREBF1-221ENST00000583080 OSBPP22059 807 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 PRMT2P55345 433 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 LPIN2Q92539 896 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 FAM198AQ9UFP1 575 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 SRRDQ9UH36 339 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SREBF1-221ENST00000583080 DOCK2Q92608 1830 aa20.22■□□□□ 0.83
SREBF1-221ENST00000583080 ATRNL1Q5VV63 1379 aa20.21■□□□□ 0.83
SREBF1-221ENST00000583080 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-221ENST00000583080 NOL9Q5SY16 702 aaKnown RBP20.21■□□□□ 0.83
SREBF1-221ENST00000583080 ZFPM1Q8IX07 1006 aa20.21■□□□□ 0.83
SREBF1-221ENST00000583080 MYPNQ86TC9 1320 aa20.21■□□□□ 0.83
SREBF1-221ENST00000583080 SIL1Q9H173 461 aa20.2■□□□□ 0.82
SREBF1-221ENST00000583080 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-221ENST00000583080 CYP2C8P10632 490 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 GRK4P32298 578 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 ATP2B3Q16720 1220 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 GPAT2Q6NUI2 795 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 RAET1EQ8TD07 263 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 USP40Q9NVE5 1235 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 RFX7Q2KHR2 1363 aa20.19■□□□□ 0.82
SREBF1-221ENST00000583080 MGAMO43451 1857 aa20.18■□□□□ 0.82
SREBF1-221ENST00000583080 LDHBP07195 334 aaKnown RBP20.18■□□□□ 0.82
SREBF1-221ENST00000583080 BCRP11274 1271 aa20.18■□□□□ 0.82
SREBF1-221ENST00000583080 PRKCZQ05513 592 aa20.18■□□□□ 0.82
SREBF1-221ENST00000583080 CHRDL2Q6WN34 429 aa20.18■□□□□ 0.82
SREBF1-221ENST00000583080 PARK7Q99497 189 aaKnown RBP20.18■□□□□ 0.82
SREBF1-221ENST00000583080 SLURP2P0DP57 97 aa20.17■□□□□ 0.82
SREBF1-221ENST00000583080 CCL5P13501 91 aa20.17■□□□□ 0.82
SREBF1-221ENST00000583080 PHKA1P46020 1223 aa20.17■□□□□ 0.82
SREBF1-221ENST00000583080 MYH2Q9UKX2 1941 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 PHF20L1A8MW92 1017 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 HOXD10P28358 340 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 RGS3P49796 1198 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 UBE2Q1Q7Z7E8 422 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 SALL1Q9NSC2 1324 aa20.16■□□□□ 0.82
SREBF1-221ENST00000583080 PTPRFP10586 1907 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 CIAO1O76071 339 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 ADORA1P30542 326 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 GJA8P48165 433 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 SH3BP5LQ7L8J4 393 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 SCYL3Q8IZE3 742 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 DPF3Q92784 378 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 GABRQQ9UN88 632 aa20.15■□□□□ 0.82
SREBF1-221ENST00000583080 DOCK1Q14185 1865 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 GAKO14976 1311 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-221ENST00000583080 E9PSI1 815 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 CXCL11O14625 94 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 GJB1P08034 283 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 FCGRTP55899 365 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-221ENST00000583080 RNF208Q9H0X6 261 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
SREBF1-221ENST00000583080 CEP126Q9P2H0 1117 aa20.14■□□□□ 0.81
SREBF1-221ENST00000583080 RBM27Q9P2N5 1060 aaKnown RBP20.14■□□□□ 0.81
SREBF1-221ENST00000583080 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-221ENST00000583080 DENND2AQ9ULE3 1009 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms