RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 ZNF384Q8TF68 577 aa23.05■■□□□ 1.28
LIMS2-218ENST00000582671 EAF2Q96CJ1 260 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-218ENST00000582671 TLR7Q9NYK1 1049 aaKnown RBP23.05■■□□□ 1.28
LIMS2-218ENST00000582671 TMOD2Q9NZR1 351 aa23.05■■□□□ 1.28
LIMS2-218ENST00000582671 GAKO14976 1311 aa23.05■■□□□ 1.28
LIMS2-218ENST00000582671 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 DOCK2Q92608 1830 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 CA12O43570 354 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 UQCRFS1P1P0C7P4 283 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 IFFO2Q5TF58 517 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 FAM83AQ86UY5 434 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 TNS4Q8IZW8 715 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 YTHDC1Q96MU7 727 aaKnown RBP23.04■■□□□ 1.28
LIMS2-218ENST00000582671 CCDC8Q9H0W5 538 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-218ENST00000582671 RNF186Q9NXI6 227 aa23.04■■□□□ 1.28
LIMS2-218ENST00000582671 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-218ENST00000582671 DBNLQ9UJU6 430 aaKnown RBP23.04■■□□□ 1.28
LIMS2-218ENST00000582671 NFIAQ12857 509 aa23.03■■□□□ 1.28
LIMS2-218ENST00000582671 DZIP1Q86YF9 867 aaKnown RBP23.03■■□□□ 1.28
LIMS2-218ENST00000582671 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-218ENST00000582671 CDK5RAP2Q96SN8 1893 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 IREB2P48200 963 aaKnown RBP23.02■■□□□ 1.28
LIMS2-218ENST00000582671 MECOMQ03112 1051 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 TTC39AQ5SRH9 613 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 SPRYD7Q5W111 196 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 SPTY2D1Q68D10 685 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-218ENST00000582671 ERICH6Q7L0X2 663 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 SLC10A4Q96EP9 437 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 SNRKQ9NRH2 765 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 USP40Q9NVE5 1235 aa23.02■■□□□ 1.28
LIMS2-218ENST00000582671 CCDC158Q5M9N0 1113 aa23.01■■□□□ 1.27
LIMS2-218ENST00000582671 REM2Q8IYK8 340 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-218ENST00000582671 FAM163AQ96GL9 167 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-218ENST00000582671 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-218ENST00000582671 UNCXA6NJT0 531 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 TRPA1O75762 1119 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 TCP10Q12799 353 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 PPP1R3FQ6ZSY5 799 aaPredicted RBP23■■□□□ 1.27
LIMS2-218ENST00000582671 ERC1Q8IUD2 1116 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 ANKRD13AQ8IZ07 590 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 FAM151AQ8WW52 585 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 NSUN4Q96CB9 384 aaKnown RBP23■■□□□ 1.27
LIMS2-218ENST00000582671 WNK4Q96J92 1243 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 FAM198AQ9UFP1 575 aa23■■□□□ 1.27
LIMS2-218ENST00000582671 TM4SF4P48230 202 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 RHPN1Q8TCX5 695 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 ZNF512BQ96KM6 892 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-218ENST00000582671 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
LIMS2-218ENST00000582671 IL1RAPL2Q9NP60 686 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 SAGE1Q9NXZ1 904 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 MROH7-TTC4A0A0A0MT08 1334 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 RFX7Q2KHR2 1363 aa22.99■■□□□ 1.27
LIMS2-218ENST00000582671 GJA5P36382 358 aa22.98■■□□□ 1.27
LIMS2-218ENST00000582671 BTDP43251 543 aa22.98■■□□□ 1.27
LIMS2-218ENST00000582671 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.98■■□□□ 1.27
LIMS2-218ENST00000582671 RAI14Q9P0K7 980 aa22.98■■□□□ 1.27
LIMS2-218ENST00000582671 FOCADQ5VW36 1801 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 GPR75-ASB3A0A0A6YYF3 556 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 APBB1O00213 710 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 HMMRO75330 724 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 CYP2E1P05181 493 aaPredicted RBP22.97■■□□□ 1.27
LIMS2-218ENST00000582671 HSP90AB4PQ58FF6 505 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 AACSQ86V21 672 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 SLF2Q8IX21 1173 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 IDI2Q9BXS1 227 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 ELP3Q9H9T3 547 aa22.97■■□□□ 1.27
LIMS2-218ENST00000582671 ZBTB48P10074 688 aaPredicted RBP22.96■■□□□ 1.27
LIMS2-218ENST00000582671 ZAP70P43403 619 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 RGS3P49796 1198 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 MAP3K9P80192 1104 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 VGLL4Q14135 290 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 MIGA2Q7L4E1 593 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 LRP2BPQ9P2M1 347 aa22.96■■□□□ 1.27
LIMS2-218ENST00000582671 WDHD1O75717 1129 aaPredicted RBP22.95■■□□□ 1.26
LIMS2-218ENST00000582671 RHBDL3P58872 404 aa22.95■■□□□ 1.26
LIMS2-218ENST00000582671 CNKSR2Q8WXI2 1034 aa22.95■■□□□ 1.26
LIMS2-218ENST00000582671 PIH1D3Q9NQM4 214 aaKnown RBP22.95■■□□□ 1.26
LIMS2-218ENST00000582671 SH3BP5LQ7L8J4 393 aa22.94■■□□□ 1.26
LIMS2-218ENST00000582671 DDX4Q9NQI0 724 aaKnown RBP22.94■■□□□ 1.26
LIMS2-218ENST00000582671 NDUFB9Q9Y6M9 179 aa22.94■■□□□ 1.26
LIMS2-218ENST00000582671 ENTPD3O75355 529 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 LDHCP07864 332 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 GSTO1P78417 241 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 SREBF2Q12772 1141 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 ZKSCAN4Q969J2 545 aaPredicted RBP22.93■■□□□ 1.26
LIMS2-218ENST00000582671 OPTNQ96CV9 577 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
LIMS2-218ENST00000582671 MANSC4A6NHS7 340 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-218ENST00000582671 TBC1D8O95759 1140 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 DCAF15Q66K64 600 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 HOOK2Q96ED9 719 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 WRNIP1Q96S55 665 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 ZNF341Q9BYN7 854 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 SNCAIPQ9Y6H5 919 aa22.92■■□□□ 1.26
LIMS2-218ENST00000582671 ATRNL1Q5VV63 1379 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 RAB11FIP3O75154 756 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 RRP1P56182 461 aaKnown RBP22.91■■□□□ 1.26
LIMS2-218ENST00000582671 PICALMQ13492 652 aa22.91■■□□□ 1.26
LIMS2-218ENST00000582671 ADGRA1Q86SQ6 560 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms