RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 SMC2O95347 1197 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 HOOK2Q96ED9 719 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 CYP2E1P05181 493 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 GZF1Q9H116 711 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 FGFR2P21802 821 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 DOT1LQ8TEK3 1739 aa11.73□□□□□ -0.53
TRAPPC8-211ENST00000582539 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 FIBPO43427 364 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 TPM1P09493 284 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 RILPL1Q5EBL4 403 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 EHMT1Q9H9B1 1298 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 BAG6P46379 1132 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 IFNL3Q8IZI9 196 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 JARID2Q92833 1246 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 COA1Q9GZY4 146 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 RXRBP28702 533 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 TFCP2L1Q9NZI6 479 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
TRAPPC8-211ENST00000582539 TLR7Q9NYK1 1049 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-211ENST00000582539 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
TRAPPC8-211ENST00000582539 ANAPC4Q9UJX5 808 aa11.71□□□□□ -0.53
TRAPPC8-211ENST00000582539 MYO3BQ8WXR4 1341 aa11.71□□□□□ -0.53
TRAPPC8-211ENST00000582539 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
TRAPPC8-211ENST00000582539 ME1P48163 572 aa11.71□□□□□ -0.54
TRAPPC8-211ENST00000582539 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.54
TRAPPC8-211ENST00000582539 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.54
TRAPPC8-211ENST00000582539 EVCP57679 992 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 STX1AQ16623 288 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 PALD1Q9ULE6 856 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 A0A1W2PQ27 194 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 A0A1W2PQ64 194 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 A0A1W2PQD8 194 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 STRBPQ96SI9 672 aaKnown RBP11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 H0YIN7 160 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 TUBB4AP04350 444 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 SERPINB2P05120 415 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 CYP21A2P08686 494 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 PPARAQ07869 468 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 ALG1Q9BT22 464 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 PLSCR1O15162 318 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 ORC4O43929 436 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 FGAP02671 866 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 PHKA1P46020 1223 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 STK3Q13188 491 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 DRC7Q8IY82 874 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 SH2D4AQ9H788 454 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 LMBRD1Q9NUN5 540 aa11.7□□□□□ -0.54
TRAPPC8-211ENST00000582539 TSPY2A6NKD2 308 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 ITPK1Q13572 414 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 ITGB4P16144 1822 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 UFL1O94874 794 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 MINDY4BA8MYZ0 360 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 STIM1Q13586 685 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 ME3Q16798 604 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 LINC00116Q8NCU8 138 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 IQSEC3Q9UPP2 1182 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
TRAPPC8-211ENST00000582539 MCAMP43121 646 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 EXOSC10Q01780 885 aaKnown RBP11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 MASTLQ96GX5 879 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 RANBP6O60518 1105 aaKnown RBP11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 CUTAO60888 179 aa11.68□□□□□ -0.54
TRAPPC8-211ENST00000582539 GNA11P29992 359 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms