RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 GNAI2P04899 355 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 IFIT1P09914 478 aaKnown RBP12.08□□□□□ -0.48
TOP3A-211ENST00000581536 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-211ENST00000581536 ADORA1P30542 326 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 ECE1P42892 770 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 RBM5P52756 815 aaKnown RBP eCLIP12.08□□□□□ -0.48
TOP3A-211ENST00000581536 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
TOP3A-211ENST00000581536 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
TOP3A-211ENST00000581536 PITPNM2Q9BZ72 1349 aa12.08□□□□□ -0.48
TOP3A-211ENST00000581536 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-211ENST00000581536 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-211ENST00000581536 CIAO1O76071 339 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 SLC5A1P13866 664 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 TFCP2Q12800 502 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 PRKG1Q13976 671 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 RGMBQ6NW40 437 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
TOP3A-211ENST00000581536 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 PANK1Q8TE04 598 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 LPIN2Q92539 896 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 CASP8AP2Q9UKL3 1982 aa12.07□□□□□ -0.48
TOP3A-211ENST00000581536 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-211ENST00000581536 MMP14P50281 582 aa12.06□□□□□ -0.48
TOP3A-211ENST00000581536 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
TOP3A-211ENST00000581536 MTX1Q13505 466 aa12.06□□□□□ -0.48
TOP3A-211ENST00000581536 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
TOP3A-211ENST00000581536 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
TOP3A-211ENST00000581536 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
TOP3A-211ENST00000581536 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
TOP3A-211ENST00000581536 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 MAP2K2P36507 400 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 PHKA1P46020 1223 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 CRKP46108 304 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 LBX1P52954 281 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 MAP3K9P80192 1104 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
TOP3A-211ENST00000581536 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 ARAP2Q8WZ64 1704 aa12.05□□□□□ -0.48
TOP3A-211ENST00000581536 MYH2Q9UKX2 1941 aa12.04□□□□□ -0.48
TOP3A-211ENST00000581536 KIF23Q02241 960 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 ITPRIPQ8IWB1 547 aa12.04□□□□□ -0.48
TOP3A-211ENST00000581536 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-211ENST00000581536 A0A1B0GUL7 405 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 HSPA8P11142 646 aaKnown RBP12.03□□□□□ -0.48
TOP3A-211ENST00000581536 NBPF12Q5TAG4 269 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-211ENST00000581536 CCDC102BQ68D86 513 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 XAGE2Q96GT9 111 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 NEUROD6Q96NK8 337 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
TOP3A-211ENST00000581536 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
TOP3A-211ENST00000581536 PAPPA2Q9BXP8 1791 aa12.02□□□□□ -0.48
TOP3A-211ENST00000581536 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.48
TOP3A-211ENST00000581536 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 TCP10L2B9ZVM9 353 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 MYO1BO43795 1136 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 CTCFP49711 727 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-211ENST00000581536 CACNB3P54284 484 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.49
TOP3A-211ENST00000581536 RASA3Q14644 834 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 SSH3Q8TE77 659 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 TBC1D22AQ8WUA7 517 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 CCDC102AQ96A19 550 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
TOP3A-211ENST00000581536 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.49
TOP3A-211ENST00000581536 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-211ENST00000581536 SLC10A3P09131 477 aa12.01□□□□□ -0.49
TOP3A-211ENST00000581536 NOGQ13253 232 aa12.01□□□□□ -0.49
TOP3A-211ENST00000581536 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
TOP3A-211ENST00000581536 RASAL3Q86YV0 1011 aa12.01□□□□□ -0.49
TOP3A-211ENST00000581536 WDR66Q8TBY9 1149 aa12.01□□□□□ -0.49
TOP3A-211ENST00000581536 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
TOP3A-211ENST00000581536 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
TOP3A-211ENST00000581536 PRDX5P30044 214 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 NF2P35240 595 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 FKBP1BP68106 108 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
TOP3A-211ENST00000581536 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 LDLRAD1Q5T700 205 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 TEKT1Q969V4 418 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 TEPSINQ96N21 525 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 MRIQ9BWK5 157 aa12□□□□□ -0.49
TOP3A-211ENST00000581536 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms