RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 ALDH1A1P00352 501 aa26.34■■□□□ 1.81
CSNK1D-216ENST00000581108 G3BP1Q13283 466 aaKnown RBP eCLIP26.34■■□□□ 1.81
CSNK1D-216ENST00000581108 VGLL4Q14135 290 aa26.34■■□□□ 1.81
CSNK1D-216ENST00000581108 RLBP1P12271 317 aa26.33■■□□□ 1.81
CSNK1D-216ENST00000581108 MVPQ14764 893 aaKnown RBP26.33■■□□□ 1.81
CSNK1D-216ENST00000581108 NOM1Q5C9Z4 860 aaKnown RBP26.33■■□□□ 1.81
CSNK1D-216ENST00000581108 FTSJ3Q8IY81 847 aaKnown RBP26.33■■□□□ 1.81
CSNK1D-216ENST00000581108 CNKSR2Q8WXI2 1034 aa26.33■■□□□ 1.81
CSNK1D-216ENST00000581108 FAM151AQ8WW52 585 aa26.32■■□□□ 1.8
CSNK1D-216ENST00000581108 ABCF2Q9UG63 623 aa26.32■■□□□ 1.8
CSNK1D-216ENST00000581108 CSADQ9Y600 493 aa26.32■■□□□ 1.8
CSNK1D-216ENST00000581108 ATP8B2P98198 1209 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 TCP10Q12799 353 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 NFIAQ12857 509 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 ZGPATQ8N5A5 531 aaKnown RBP26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 PTPN18Q99952 460 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 C1orf115Q9H7X2 142 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 USP40Q9NVE5 1235 aa26.31■■□□□ 1.8
CSNK1D-216ENST00000581108 FKTNO75072 461 aa26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 POLA2Q14181 598 aa26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 MIGA2Q7L4E1 593 aa26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 ITPRIPQ8IWB1 547 aa26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 HOOK2Q96ED9 719 aa26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 PDS5AQ29RF7 1337 aaKnown RBP26.3■■□□□ 1.8
CSNK1D-216ENST00000581108 TESPA1A2RU30 521 aaPredicted RBP26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 ZBTB7BO15156 539 aaPredicted RBP26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 GORABQ5T7V8 394 aa26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 ZKSCAN4Q969J2 545 aaPredicted RBP26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 MS4A4AQ96JQ5 239 aa26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 WRNIP1Q96S55 665 aa26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 RPAP1Q9BWH6 1393 aaPredicted RBP26.29■■□□□ 1.8
CSNK1D-216ENST00000581108 OTUD7BQ6GQQ9 843 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 SSH3Q8TE77 659 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 OTUD5Q96G74 571 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 HMG20BQ9P0W2 317 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 FAM198AQ9UFP1 575 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 SNCAIPQ9Y6H5 919 aa26.28■■□□□ 1.8
CSNK1D-216ENST00000581108 DCAF15Q66K64 600 aa26.27■■□□□ 1.8
CSNK1D-216ENST00000581108 SPTY2D1Q68D10 685 aaPredicted RBP26.27■■□□□ 1.8
CSNK1D-216ENST00000581108 DZIP1Q86YF9 867 aaKnown RBP26.27■■□□□ 1.8
CSNK1D-216ENST00000581108 GAKO14976 1311 aa26.26■■□□□ 1.79
CSNK1D-216ENST00000581108 PI16Q6UXB8 463 aa26.26■■□□□ 1.79
CSNK1D-216ENST00000581108 ZFPM1Q8IX07 1006 aa26.26■■□□□ 1.79
CSNK1D-216ENST00000581108 ZNF341Q9BYN7 854 aa26.26■■□□□ 1.79
CSNK1D-216ENST00000581108 SPDYE5A6NIY4 337 aa26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 RGS19P49795 217 aa26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 CRHR2Q13324 411 aa26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 PKN2Q16513 984 aaKnown RBP26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 SPATA5Q8NB90 893 aa26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 BRI3BPQ8WY22 251 aa26.25■■□□□ 1.79
CSNK1D-216ENST00000581108 CCL15-CCL14A0A0B4J2E2 113 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 SURF6O75683 361 aaKnown RBP26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 ARID4AP29374 1257 aaPredicted RBP26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 GTF2A2P52657 109 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 MECOMQ03112 1051 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 OS9Q13438 667 aaPredicted RBP26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 CCL15Q16663 113 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 TBC1D9Q6ZT07 1266 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 ERICH6Q7L0X2 663 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 ERO1BQ86YB8 467 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 SLF2Q8IX21 1173 aa26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 FAM163AQ96GL9 167 aaPredicted RBP26.24■■□□□ 1.79
CSNK1D-216ENST00000581108 INPP5BP32019 993 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 RGS3P49796 1198 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 PANK1Q8TE04 598 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 ZNF384Q8TF68 577 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 IDI2Q9BXS1 227 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 HPS5Q9UPZ3 1129 aa26.23■■□□□ 1.79
CSNK1D-216ENST00000581108 MCAMP43121 646 aa26.22■■□□□ 1.79
CSNK1D-216ENST00000581108 TNNI3KQ59H18 835 aa26.22■■□□□ 1.79
CSNK1D-216ENST00000581108 GPR108Q9NPR9 543 aa26.22■■□□□ 1.79
CSNK1D-216ENST00000581108 FPGT-TNNI3KV9GXZ4 949 aa26.22■■□□□ 1.79
CSNK1D-216ENST00000581108 BTDP43251 543 aa26.21■■□□□ 1.79
CSNK1D-216ENST00000581108 ZNF112Q9UJU3 913 aa26.21■■□□□ 1.79
CSNK1D-216ENST00000581108 MROH7-TTC4A0A0A0MT08 1334 aa26.2■■□□□ 1.79
CSNK1D-216ENST00000581108 IRF6O14896 467 aa26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 ENTPD3O75355 529 aa26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 UQCRFS1P1P0C7P4 283 aa26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 FAM43AQ8N2R8 423 aa26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 DBNDD2Q9BQY9 259 aa26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 NOP58Q9Y2X3 529 aaKnown RBP26.2■■□□□ 1.78
CSNK1D-216ENST00000581108 GPR75-ASB3A0A0A6YYF3 556 aa26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 WDHD1O75717 1129 aaPredicted RBP26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 MLLT1Q03111 559 aaPredicted RBP26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 PPIL2Q13356 520 aa26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 SH3BP5LQ7L8J4 393 aa26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 NSUN4Q96CB9 384 aaKnown RBP26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 SNRKQ9NRH2 765 aa26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 RAI14Q9P0K7 980 aa26.19■■□□□ 1.78
CSNK1D-216ENST00000581108 DOCK2Q92608 1830 aa26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 CETPP11597 493 aa26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 SOX10P56693 466 aa26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 PPATQ06203 517 aa26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 FBXO46Q6PJ61 603 aaPredicted RBP26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 DDX4Q9NQI0 724 aaKnown RBP26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 RFX7Q2KHR2 1363 aa26.18■■□□□ 1.78
CSNK1D-216ENST00000581108 SNAPC2Q13487 334 aa26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 PICALMQ13492 652 aa26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 TAF1CQ15572 869 aaPredicted RBP26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 CCDC158Q5M9N0 1113 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms