RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
NUP85-215ENST00000580879 LRP2BPQ9P2M1 347 aa16.24■□□□□ 0.19
NUP85-215ENST00000580879 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
NUP85-215ENST00000580879 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
NUP85-215ENST00000580879 NFIAQ12857 509 aa16.23■□□□□ 0.19
NUP85-215ENST00000580879 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
NUP85-215ENST00000580879 ARMC9Q7Z3E5 817 aa16.23■□□□□ 0.19
NUP85-215ENST00000580879 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
NUP85-215ENST00000580879 TEPSINQ96N21 525 aa16.23■□□□□ 0.19
NUP85-215ENST00000580879 PIH1D3Q9NQM4 214 aaKnown RBP16.23■□□□□ 0.19
NUP85-215ENST00000580879 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
NUP85-215ENST00000580879 MROH7-TTC4A0A0A0MT08 1334 aa16.22■□□□□ 0.19
NUP85-215ENST00000580879 GAKO14976 1311 aa16.22■□□□□ 0.19
NUP85-215ENST00000580879 FAM155AB1AL88 458 aaPredicted RBP16.22■□□□□ 0.19
NUP85-215ENST00000580879 BTDP43251 543 aa16.22■□□□□ 0.19
NUP85-215ENST00000580879 TCP10Q12799 353 aa16.22■□□□□ 0.19
NUP85-215ENST00000580879 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
NUP85-215ENST00000580879 AKAP11Q9UKA4 1901 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 SLC10A3P09131 477 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 SLF2Q8IX21 1173 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
NUP85-215ENST00000580879 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
NUP85-215ENST00000580879 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
NUP85-215ENST00000580879 GSTO1P78417 241 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
NUP85-215ENST00000580879 NOGQ13253 232 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 FAM83AQ86UY5 434 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 CCDC102AQ96A19 550 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 FAM163AQ96GL9 167 aaPredicted RBP16.2■□□□□ 0.18
NUP85-215ENST00000580879 CLMNQ96JQ2 1002 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 WBP1LQ9NX94 342 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 FAM198AQ9UFP1 575 aa16.2■□□□□ 0.18
NUP85-215ENST00000580879 THSD7BQ9C0I4 1608 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 FOXN1O15353 648 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
NUP85-215ENST00000580879 MAP2K2P36507 400 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 KIF23Q02241 960 aaPredicted RBP16.19■□□□□ 0.18
NUP85-215ENST00000580879 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
NUP85-215ENST00000580879 LDLRAD1Q5T700 205 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 NAA16Q6N069 864 aaPredicted RBP16.19■□□□□ 0.18
NUP85-215ENST00000580879 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 AIDAQ96BJ3 306 aa16.19■□□□□ 0.18
NUP85-215ENST00000580879 LDHCP07864 332 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 IREB2P48200 963 aaKnown RBP16.18■□□□□ 0.18
NUP85-215ENST00000580879 RGS3P49796 1198 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 PICALMQ13492 652 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 MAP3K11Q16584 847 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 ADGRA1Q86SQ6 560 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 FAM151AQ8WW52 585 aa16.18■□□□□ 0.18
NUP85-215ENST00000580879 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
NUP85-215ENST00000580879 WDHD1O75717 1129 aaPredicted RBP16.17■□□□□ 0.18
NUP85-215ENST00000580879 RHBDL3P58872 404 aa16.17■□□□□ 0.18
NUP85-215ENST00000580879 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
NUP85-215ENST00000580879 MIGA2Q7L4E1 593 aa16.17■□□□□ 0.18
NUP85-215ENST00000580879 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
NUP85-215ENST00000580879 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
NUP85-215ENST00000580879 DDX4Q9NQI0 724 aaKnown RBP16.17■□□□□ 0.18
NUP85-215ENST00000580879 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 GOLIM4O00461 696 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 CYP7A1P22680 504 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
NUP85-215ENST00000580879 SLC10A4Q96EP9 437 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 IDI2Q9BXS1 227 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 AATFQ9NY61 560 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUP85-215ENST00000580879 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
NUP85-215ENST00000580879 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
NUP85-215ENST00000580879 RPAP1Q9BWH6 1393 aaPredicted RBP16.15■□□□□ 0.18
NUP85-215ENST00000580879 TSHZ3Q63HK5 1081 aa16.15■□□□□ 0.18
NUP85-215ENST00000580879 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
NUP85-215ENST00000580879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
NUP85-215ENST00000580879 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
NUP85-215ENST00000580879 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
NUP85-215ENST00000580879 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 ENTPD3O75355 529 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 ATP5JP18859 108 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 DYNLL1P63167 89 aaKnown RBP16.14■□□□□ 0.17
NUP85-215ENST00000580879 MAP3K12Q12852 859 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.14■□□□□ 0.17
NUP85-215ENST00000580879 ZSCAN29Q8IWY8 852 aaPredicted RBP16.14■□□□□ 0.17
NUP85-215ENST00000580879 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 ANKRD13AQ8IZ07 590 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 MIGA1Q8NAN2 632 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.17
NUP85-215ENST00000580879 CSRNP1Q96S65 589 aa16.14■□□□□ 0.17
NUP85-215ENST00000580879 DDTLA6NHG4 134 aaPredicted RBP16.13■□□□□ 0.17
NUP85-215ENST00000580879 BAG3O95817 575 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
NUP85-215ENST00000580879 MAP3K9P80192 1104 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 VGLL4Q14135 290 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms