RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 U2AF1L4Q8WU68 220 aaKnown RBP24.42■■□□□ 1.5
LIMD2-209ENST00000580222 UNC93B1Q9H1C4 597 aa24.42■■□□□ 1.5
LIMD2-209ENST00000580222 STAP2Q9UGK3 403 aa24.42■■□□□ 1.5
LIMD2-209ENST00000580222 NR2E3Q9Y5X4 410 aa24.42■■□□□ 1.5
LIMD2-209ENST00000580222 MYPNQ86TC9 1320 aa24.41■■□□□ 1.5
LIMD2-209ENST00000580222 PDHXO00330 501 aa24.41■■□□□ 1.5
LIMD2-209ENST00000580222 INPP5BP32019 993 aa24.41■■□□□ 1.5
LIMD2-209ENST00000580222 PRKCZQ05513 592 aa24.41■■□□□ 1.5
LIMD2-209ENST00000580222 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
LIMD2-209ENST00000580222 IQSEC3Q9UPP2 1182 aaPredicted RBP24.41■■□□□ 1.5
LIMD2-209ENST00000580222 A0A1B0GUL6 1792 aa24.41■■□□□ 1.5
LIMD2-209ENST00000580222 FARP2O94887 1054 aaPredicted RBP24.4■■□□□ 1.5
LIMD2-209ENST00000580222 FKBP5Q13451 457 aaPredicted RBP24.4■■□□□ 1.5
LIMD2-209ENST00000580222 MIGA2Q7L4E1 593 aa24.4■■□□□ 1.5
LIMD2-209ENST00000580222 CNNM1Q9NRU3 951 aa24.4■■□□□ 1.5
LIMD2-209ENST00000580222 BIN2Q9UBW5 565 aaPredicted RBP24.4■■□□□ 1.5
LIMD2-209ENST00000580222 GABRQQ9UN88 632 aa24.4■■□□□ 1.5
LIMD2-209ENST00000580222 ANKRD23Q86SG2 305 aa24.39■■□□□ 1.49
LIMD2-209ENST00000580222 TRMT2AQ8IZ69 625 aaKnown RBP24.39■■□□□ 1.49
LIMD2-209ENST00000580222 ARAP2Q8WZ64 1704 aa24.38■■□□□ 1.49
LIMD2-209ENST00000580222 F6X3S4 739 aa24.38■■□□□ 1.49
LIMD2-209ENST00000580222 HOXD10P28358 340 aa24.38■■□□□ 1.49
LIMD2-209ENST00000580222 PPATQ06203 517 aa24.38■■□□□ 1.49
LIMD2-209ENST00000580222 UBE4AQ14139 1066 aa24.38■■□□□ 1.49
LIMD2-209ENST00000580222 APOBEC3HQ6NTF7 200 aaKnown RBP24.38■■□□□ 1.49
LIMD2-209ENST00000580222 UNC80Q8N2C7 3258 aa24.37■■□□□ 1.49
LIMD2-209ENST00000580222 SGPL1O95470 568 aa24.37■■□□□ 1.49
LIMD2-209ENST00000580222 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
LIMD2-209ENST00000580222 CCDC57Q2TAC2 916 aa24.37■■□□□ 1.49
LIMD2-209ENST00000580222 BEND3Q5T5X7 828 aa24.37■■□□□ 1.49
LIMD2-209ENST00000580222 A0A1W2PPC1 479 aa24.36■■□□□ 1.49
LIMD2-209ENST00000580222 FBXO33Q7Z6M2 555 aa24.36■■□□□ 1.49
LIMD2-209ENST00000580222 KCNH4Q9UQ05 1017 aa24.36■■□□□ 1.49
LIMD2-209ENST00000580222 EVI5O60447 810 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 CYP2C8P10632 490 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 BCRP11274 1271 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 HDLBPQ00341 1268 aaKnown RBP24.35■■□□□ 1.49
LIMD2-209ENST00000580222 TAF7LQ5H9L4 462 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 GPAT2Q6NUI2 795 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 FAM83AQ86UY5 434 aa24.35■■□□□ 1.49
LIMD2-209ENST00000580222 MNX1P50219 401 aaPredicted RBP24.34■■□□□ 1.49
LIMD2-209ENST00000580222 UBXN2AP68543 259 aa24.34■■□□□ 1.49
LIMD2-209ENST00000580222 TEKT1Q969V4 418 aa24.34■■□□□ 1.49
LIMD2-209ENST00000580222 ZDHHC15Q96MV8 337 aa24.34■■□□□ 1.49
LIMD2-209ENST00000580222 ELNP15502 786 aa24.33■■□□□ 1.49
LIMD2-209ENST00000580222 ZNF341Q9BYN7 854 aa24.33■■□□□ 1.49
LIMD2-209ENST00000580222 ZNF112Q9UJU3 913 aa24.33■■□□□ 1.49
LIMD2-209ENST00000580222 FKBP1CQ5VVH2 108 aa24.32■■□□□ 1.48
LIMD2-209ENST00000580222 Q7L0L9 218 aa24.32■■□□□ 1.48
LIMD2-209ENST00000580222 SLAIN1Q8ND83 568 aa24.31■■□□□ 1.48
LIMD2-209ENST00000580222 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
LIMD2-209ENST00000580222 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
LIMD2-209ENST00000580222 ADCY3O60266 1144 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 VAMP4O75379 141 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 TFRCP02786 760 aaKnown RBP24.3■■□□□ 1.48
LIMD2-209ENST00000580222 INHAP05111 366 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 FCGRTP55899 365 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 DCAF15Q66K64 600 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 GDF15Q99988 308 aa24.3■■□□□ 1.48
LIMD2-209ENST00000580222 GRM8O00222 908 aa24.29■■□□□ 1.48
LIMD2-209ENST00000580222 FLT3LGP49771 235 aa24.29■■□□□ 1.48
LIMD2-209ENST00000580222 DIS3LQ8TF46 1054 aaKnown RBP24.29■■□□□ 1.48
LIMD2-209ENST00000580222 PAWRQ96IZ0 340 aaKnown RBP24.29■■□□□ 1.48
LIMD2-209ENST00000580222 MRIQ9BWK5 157 aa24.29■■□□□ 1.48
LIMD2-209ENST00000580222 CT47B1P0C2W7 299 aaPredicted RBP24.28■■□□□ 1.48
LIMD2-209ENST00000580222 BCAMP50895 628 aa24.28■■□□□ 1.48
LIMD2-209ENST00000580222 DEFB123Q8N688 67 aa24.28■■□□□ 1.48
LIMD2-209ENST00000580222 TMOD2Q9NZR1 351 aa24.28■■□□□ 1.48
LIMD2-209ENST00000580222 TBC1D22AQ8WUA7 517 aa24.27■■□□□ 1.48
LIMD2-209ENST00000580222 HOOK2Q96ED9 719 aa24.27■■□□□ 1.48
LIMD2-209ENST00000580222 CRISPLD2Q9H0B8 497 aa24.27■■□□□ 1.48
LIMD2-209ENST00000580222 RPAP1Q9BWH6 1393 aaPredicted RBP24.27■■□□□ 1.48
LIMD2-209ENST00000580222 TCP10Q12799 353 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 NFIAQ12857 509 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 LRRC24Q50LG9 513 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 VPS37DQ86XT2 251 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 FAM151AQ8WW52 585 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 SUCLG2Q96I99 432 aa24.26■■□□□ 1.47
LIMD2-209ENST00000580222 PARK7Q99497 189 aaKnown RBP24.26■■□□□ 1.47
LIMD2-209ENST00000580222 PAK6Q9NQU5 681 aaPredicted RBP24.26■■□□□ 1.47
LIMD2-209ENST00000580222 ZMYND8Q9ULU4 1186 aaPredicted RBP24.26■■□□□ 1.47
LIMD2-209ENST00000580222 NOL9Q5SY16 702 aaKnown RBP24.25■■□□□ 1.47
LIMD2-209ENST00000580222 ZFPM1Q8IX07 1006 aa24.25■■□□□ 1.47
LIMD2-209ENST00000580222 FRAT2O75474 233 aaPredicted RBP24.24■■□□□ 1.47
LIMD2-209ENST00000580222 BMP8BP34820 402 aa24.24■■□□□ 1.47
LIMD2-209ENST00000580222 HHIPL2Q6UWX4 724 aa24.24■■□□□ 1.47
LIMD2-209ENST00000580222 CXCL11O14625 94 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 CDC42EP5Q6NZY7 148 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 C7orf61Q8IZ16 206 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 VGLL2Q8N8G2 317 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 PXYLP1Q8TE99 480 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 MTMR10Q9NXD2 777 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 FAM198AQ9UFP1 575 aa24.23■■□□□ 1.47
LIMD2-209ENST00000580222 VCANP13611 3396 aa24.22■■□□□ 1.47
LIMD2-209ENST00000580222 MROH5Q6ZUA9 1318 aa24.22■■□□□ 1.47
LIMD2-209ENST00000580222 SLURP2P0DP57 97 aa24.22■■□□□ 1.47
LIMD2-209ENST00000580222 COL25A1Q9BXS0 654 aaPredicted RBP24.22■■□□□ 1.47
LIMD2-209ENST00000580222 C9orf78Q9NZ63 289 aaPredicted RBP24.22■■□□□ 1.47
LIMD2-209ENST00000580222 STXBP5LQ9Y2K9 1186 aa24.22■■□□□ 1.47
LIMD2-209ENST00000580222 PHF20L1A8MW92 1017 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms