RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-209ENST00000580095 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
TOP3A-209ENST00000580095 ZNF202O95125 648 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 KRT40Q6A162 431 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
TOP3A-209ENST00000580095 PFKFB1P16118 471 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 PUM3Q15397 648 aaKnown RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 ZRSR1Q15695 479 aaKnown RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 PRIMPOLQ96LW4 560 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 NAPBQ9H115 298 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 IFIT3O14879 490 aaKnown RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 CTAGE5O15320 804 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 KCNJ14Q9UNX9 436 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 BCL9O00512 1426 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 ZBTB43O43298 467 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 TPM3P06753 285 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 AXDND1Q5T1B0 1012 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-209ENST00000580095 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 LPIN2Q92539 896 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 ABCF2Q9UG63 623 aa12.17□□□□□ -0.46
TOP3A-209ENST00000580095 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 SMC2O95347 1197 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 SLC3A2P08195 630 aaKnown RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 KCNA4P22459 653 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 UBE3CQ15386 1083 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 LRRC8AQ8IWT6 810 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 KCNG4Q8TDN1 519 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 ZMYM6O95789 1325 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 SKILP12757 684 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 TNNT1P13805 278 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-209ENST00000580095 ZNF34Q8IZ26 560 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
TOP3A-209ENST00000580095 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 IARSP41252 1262 aaKnown RBP12.15□□□□□ -0.46
TOP3A-209ENST00000580095 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
TOP3A-209ENST00000580095 TDO2P48775 406 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 PNOCQ13519 176 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
TOP3A-209ENST00000580095 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 ATP1A3P13637 1013 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 FGFR2P21802 821 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-209ENST00000580095 ATL3Q6DD88 541 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
TOP3A-209ENST00000580095 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 TEX2Q8IWB9 1127 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 NUP133Q8WUM0 1156 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 IFNKQ9P0W0 207 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 LRP2BPQ9P2M1 347 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 SLC4A4Q9Y6R1 1079 aa12.15□□□□□ -0.46
TOP3A-209ENST00000580095 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 FOXN1O15353 648 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 SLC5A1P13866 664 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 GRIN1Q05586 938 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 ITPK1Q13572 414 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 CYP2D7A0A087X1C5 515 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 KCNQ2O43526 872 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 YEATS4O95619 227 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms