RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PTPRFP10586 1907 aa16.66■□□□□ 0.26
TRAF4-214ENST00000580073 EYA2O00167 538 aa16.66■□□□□ 0.26
TRAF4-214ENST00000580073 FGFR2P21802 821 aa16.66■□□□□ 0.26
TRAF4-214ENST00000580073 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-214ENST00000580073 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-214ENST00000580073 BCAMP50895 628 aa16.65■□□□□ 0.26
TRAF4-214ENST00000580073 PRMT2P55345 433 aa16.65■□□□□ 0.26
TRAF4-214ENST00000580073 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
TRAF4-214ENST00000580073 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
TRAF4-214ENST00000580073 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
TRAF4-214ENST00000580073 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
TRAF4-214ENST00000580073 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
TRAF4-214ENST00000580073 SEMA3EO15041 775 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 TLR2O60603 784 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 CIAO1O76071 339 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 PPATQ06203 517 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 USP44Q9H0E7 712 aa16.64■□□□□ 0.25
TRAF4-214ENST00000580073 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 CACNB3P54284 484 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
TRAF4-214ENST00000580073 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 ZNF333Q96JL9 665 aa16.63■□□□□ 0.25
TRAF4-214ENST00000580073 CENPFP49454 3210 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 POTEFA5A3E0 1075 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 LDHBP07195 334 aaKnown RBP16.62■□□□□ 0.25
TRAF4-214ENST00000580073 GRIK5Q16478 980 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
TRAF4-214ENST00000580073 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 IRF6O14896 467 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-214ENST00000580073 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
TRAF4-214ENST00000580073 PTCH2Q9Y6C5 1203 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
TRAF4-214ENST00000580073 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
TRAF4-214ENST00000580073 ZBTB22O15209 634 aa16.6■□□□□ 0.25
TRAF4-214ENST00000580073 HOXD10P28358 340 aa16.6■□□□□ 0.25
TRAF4-214ENST00000580073 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-214ENST00000580073 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-214ENST00000580073 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
TRAF4-214ENST00000580073 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-214ENST00000580073 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
TRAF4-214ENST00000580073 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
TRAF4-214ENST00000580073 ANKRD23Q86SG2 305 aa16.59■□□□□ 0.25
TRAF4-214ENST00000580073 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
TRAF4-214ENST00000580073 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
TRAF4-214ENST00000580073 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
TRAF4-214ENST00000580073 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-214ENST00000580073 SIL1Q9H173 461 aa16.58■□□□□ 0.24
TRAF4-214ENST00000580073 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.24
TRAF4-214ENST00000580073 BCAR3O75815 825 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 PRDX5P30044 214 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 TCP10Q12799 353 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-214ENST00000580073 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
TRAF4-214ENST00000580073 LOC285556D6RIA3 1793 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 PDHXO00330 501 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 ENTPD3O75355 529 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 EN2P19622 333 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-214ENST00000580073 INPP5BP32019 993 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 DIXDC1Q155Q3 683 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 NKX2-3Q8TAU0 364 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 USP40Q9NVE5 1235 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
TRAF4-214ENST00000580073 BRCA2P51587 3418 aa16.55■□□□□ 0.24
TRAF4-214ENST00000580073 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
TRAF4-214ENST00000580073 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
TRAF4-214ENST00000580073 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
TRAF4-214ENST00000580073 GAKO14976 1311 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 CXCL11O14625 94 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 GNAI3P08754 354 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
TRAF4-214ENST00000580073 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 FASTKD5Q7L8L6 764 aaKnown RBP16.54■□□□□ 0.24
TRAF4-214ENST00000580073 ZSCAN29Q8IWY8 852 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-214ENST00000580073 SCYL3Q8IZE3 742 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 SRRDQ9UH36 339 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
TRAF4-214ENST00000580073 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
TRAF4-214ENST00000580073 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-214ENST00000580073 PSMC4P43686 418 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 PHKA1P46020 1223 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 FCGRTP55899 365 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms