RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ASB11Q8WXH4 323 aa5.35□□□□□ -1.55
KPNB1-208ENST00000580019 KCNC2Q96PR1 638 aa5.35□□□□□ -1.55
KPNB1-208ENST00000580019 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
KPNB1-208ENST00000580019 PLAGL2Q9UPG8 496 aa5.35□□□□□ -1.55
KPNB1-208ENST00000580019 SNX11Q9Y5W9 270 aa5.35□□□□□ -1.55
KPNB1-208ENST00000580019 TRPA1O75762 1119 aa5.34□□□□□ -1.55
KPNB1-208ENST00000580019 CELA3BP08861 270 aa5.34□□□□□ -1.55
KPNB1-208ENST00000580019 OXCT1P55809 520 aa5.34□□□□□ -1.55
KPNB1-208ENST00000580019 RAD18Q9NS91 495 aa5.34□□□□□ -1.55
KPNB1-208ENST00000580019 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
KPNB1-208ENST00000580019 CDK5R2Q13319 367 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 KCNN1Q92952 543 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 NXPE3Q969Y0 559 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 TNKS2Q9H2K2 1166 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 ELP3Q9H9T3 547 aa5.33□□□□□ -1.56
KPNB1-208ENST00000580019 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
KPNB1-208ENST00000580019 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
KPNB1-208ENST00000580019 KCNK12Q9HB15 430 aa5.32□□□□□ -1.56
KPNB1-208ENST00000580019 ZFYVE1Q9HBF4 777 aa5.32□□□□□ -1.56
KPNB1-208ENST00000580019 OVOL3O00110 214 aa5.31□□□□□ -1.56
KPNB1-208ENST00000580019 PTK7Q13308 1070 aa5.31□□□□□ -1.56
KPNB1-208ENST00000580019 ADAMTS19Q8TE59 1207 aa5.31□□□□□ -1.56
KPNB1-208ENST00000580019 CNTN3Q9P232 1028 aa5.31□□□□□ -1.56
KPNB1-208ENST00000580019 COG6Q9Y2V7 657 aa5.31□□□□□ -1.56
KPNB1-208ENST00000580019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.31□□□□□ -1.56
KPNB1-208ENST00000580019 ITIH2P19823 946 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 CES1P23141 567 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 MAOBP27338 520 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 ANKMY2Q8IV38 441 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 MARCH10Q8NA82 808 aaPredicted RBP5.3□□□□□ -1.56
KPNB1-208ENST00000580019 GPR152Q8TDT2 470 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 TMEM63CQ9P1W3 806 aa5.3□□□□□ -1.56
KPNB1-208ENST00000580019 CYP11A1P05108 521 aa5.29□□□□□ -1.56
KPNB1-208ENST00000580019 SRFP11831 508 aa5.29□□□□□ -1.56
KPNB1-208ENST00000580019 ZAP70P43403 619 aa5.29□□□□□ -1.56
KPNB1-208ENST00000580019 CRELD1Q96HD1 420 aa5.29□□□□□ -1.56
KPNB1-208ENST00000580019 CTSBP07858 339 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 GDNFP39905 211 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 POU4F3Q15319 338 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 FAM26DQ5JW98 314 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 ZNF438Q7Z4V0 828 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 OSMRQ99650 979 aa5.28□□□□□ -1.56
KPNB1-208ENST00000580019 LEFTY1O75610 366 aa5.27□□□□□ -1.57
KPNB1-208ENST00000580019 HDGFL1Q5TGJ6 251 aa5.27□□□□□ -1.57
KPNB1-208ENST00000580019 C16orf46Q6P387 395 aa5.27□□□□□ -1.57
KPNB1-208ENST00000580019 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
KPNB1-208ENST00000580019 ASAP3Q8TDY4 903 aa5.27□□□□□ -1.57
KPNB1-208ENST00000580019 ZBTB7CA1YPR0 619 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 SPATS1Q496A3 300 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 TCERG1LQ5VWI1 586 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 PMEPA1Q969W9 287 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 ZKSCAN3Q9BRR0 538 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 DUSP23Q9BVJ7 150 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 SAP130Q9H0E3 1048 aa5.26□□□□□ -1.57
KPNB1-208ENST00000580019 CCDC9Q9Y3X0 531 aaKnown RBP5.26□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L15C9J2P7 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L10C9JJH3 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L13C9JLJ4 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L12C9JPN9 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L11C9JVI0 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L21D6R901 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L18D6R9N7 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L22D6RA61 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L17D6RBQ6 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L19D6RCP7 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L20D6RJB6 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 AKAP8O43823 692 aaKnown RBP5.25□□□□□ -1.57
KPNB1-208ENST00000580019 TRIM13O60858 407 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 INSRRP14616 1297 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 USP17L24Q0WX57 530 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 FKBP5Q13451 457 aaPredicted RBP5.25□□□□□ -1.57
KPNB1-208ENST00000580019 MCM6Q14566 821 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 PUM1Q14671 1186 aaKnown RBP eCLIP5.25□□□□□ -1.57
KPNB1-208ENST00000580019 BAHD1Q8TBE0 780 aaPredicted RBP5.25□□□□□ -1.57
KPNB1-208ENST00000580019 BHLHE41Q9C0J9 482 aaPredicted RBP5.25□□□□□ -1.57
KPNB1-208ENST00000580019 PIDD1Q9HB75 910 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 C19orf73Q9NVV2 129 aa5.25□□□□□ -1.57
KPNB1-208ENST00000580019 SYNGAP1Q96PV0 1343 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 POM121CA8CG34 1229 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 TNFRSF10BO14763 440 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 AOC2O75106 756 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 PDIA4P13667 645 aaKnown RBP5.24□□□□□ -1.57
KPNB1-208ENST00000580019 CCDC120Q96HB5 630 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 ARID3AQ99856 593 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 XYLT2Q9H1B5 865 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 MYRFQ9Y2G1 1151 aa5.24□□□□□ -1.57
KPNB1-208ENST00000580019 MAFBQ9Y5Q3 323 aaPredicted RBP5.24□□□□□ -1.57
KPNB1-208ENST00000580019 SASH1O94885 1247 aa5.23□□□□□ -1.57
KPNB1-208ENST00000580019 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
KPNB1-208ENST00000580019 PPP1R9AQ9ULJ8 1098 aa5.23□□□□□ -1.57
KPNB1-208ENST00000580019 RPLP1P05386 114 aaKnown RBP5.22□□□□□ -1.57
KPNB1-208ENST00000580019 EFEMP1Q12805 493 aa5.22□□□□□ -1.57
KPNB1-208ENST00000580019 XKR5Q6UX68 686 aa5.22□□□□□ -1.57
KPNB1-208ENST00000580019 TMEM151BQ8IW70 566 aa5.22□□□□□ -1.57
KPNB1-208ENST00000580019 SPACA3Q8IXA5 215 aa5.22□□□□□ -1.57
KPNB1-208ENST00000580019 SMYD4Q8IYR2 804 aaPredicted RBP5.22□□□□□ -1.57
KPNB1-208ENST00000580019 WDR18Q9BV38 432 aa5.22□□□□□ -1.57
KPNB1-208ENST00000580019 ATXN3LQ9H3M9 355 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms