RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, human

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMD2-208	ENST00000579814	CDC42EP5	Q6NZY7	148 aa		32.2	■■■□□ 2.75
LIMD2-208	ENST00000579814	USP40	Q9NVE5	1235 aa		32.2	■■■□□ 2.75
LIMD2-208	ENST00000579814	TSKS	Q9UJT2	592 aa		32.2	■■■□□ 2.75
LIMD2-208	ENST00000579814	EXOC6B	Q9Y2D4	811 aa		32.2	■■■□□ 2.75
LIMD2-208	ENST00000579814	MCAM	P43121	646 aa		32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	PI16	Q6UXB8	463 aa		32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	CDAN1	Q8IWY9	1227 aa		32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	HOOK2	Q96ED9	719 aa		32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	YTHDC1	Q96MU7	727 aa	Known RBP	32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	SSC5D	A1L4H1	1573 aa		32.18	■■■□□ 2.74
LIMD2-208	ENST00000579814	IFFO2	Q5TF58	517 aa		32.17	■■■□□ 2.74
LIMD2-208	ENST00000579814	ANKRD13A	Q8IZ07	590 aa		32.17	■■■□□ 2.74
LIMD2-208	ENST00000579814	FAM163A	Q96GL9	167 aa	Predicted RBP	32.17	■■■□□ 2.74
LIMD2-208	ENST00000579814	MKRN3	Q13064	507 aa	Known RBP	32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	SPRYD7	Q5W111	196 aa		32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	TBC1D9	Q6ZT07	1266 aa		32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	EAF2	Q96CJ1	260 aa	Predicted RBP	32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	SAGE1	Q9NXZ1	904 aa		32.16	■■■□□ 2.74
LIMD2-208	ENST00000579814	GSTO1	P78417	241 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	MECOM	Q03112	1051 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	FAM151A	Q8WW52	585 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	CLMN	Q96JQ2	1002 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	RNF186	Q9NXI6	227 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	RAI14	Q9P0K7	980 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	DBNL	Q9UJU6	430 aa	Known RBP	32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	GAK	O14976	1311 aa		32.15	■■■□□ 2.74
LIMD2-208	ENST00000579814	LDHC	P07864	332 aa		32.14	■■■□□ 2.74
LIMD2-208	ENST00000579814	SIRT2	Q8IXJ6	389 aa		32.14	■■■□□ 2.74
LIMD2-208	ENST00000579814	LRP2BP	Q9P2M1	347 aa		32.14	■■■□□ 2.74
LIMD2-208	ENST00000579814	ECM29	Q5VYK3	1845 aa		32.14	■■■□□ 2.74
LIMD2-208	ENST00000579814	TRPA1	O75762	1119 aa		32.13	■■■□□ 2.73
LIMD2-208	ENST00000579814	TCP10	Q12799	353 aa		32.13	■■■□□ 2.73
LIMD2-208	ENST00000579814	SNRK	Q9NRH2	765 aa		32.13	■■■□□ 2.73
LIMD2-208	ENST00000579814	TM4SF4	P48230	202 aa		32.12	■■■□□ 2.73
LIMD2-208	ENST00000579814	MAP3K9	P80192	1104 aa		32.12	■■■□□ 2.73
LIMD2-208	ENST00000579814	SREBF2	Q12772	1141 aa		32.12	■■■□□ 2.73
LIMD2-208	ENST00000579814	RHPN1	Q8TCX5	695 aa		32.12	■■■□□ 2.73
LIMD2-208	ENST00000579814	NFIA	Q12857	509 aa		32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	DCAF15	Q66K64	600 aa		32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	AACS	Q86V21	672 aa		32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	NSUN4	Q96CB9	384 aa	Known RBP	32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	KIF1BP	Q96EK5	621 aa		32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	TLR7	Q9NYK1	1049 aa	Known RBP	32.11	■■■□□ 2.73
LIMD2-208	ENST00000579814	MROH7-TTC4	A0A0A0MT08	1334 aa		32.1	■■■□□ 2.73
LIMD2-208	ENST00000579814	ZBTB48	P10074	688 aa	Predicted RBP	32.1	■■■□□ 2.73
LIMD2-208	ENST00000579814	BTD	P43251	543 aa		32.1	■■■□□ 2.73
LIMD2-208	ENST00000579814	WNK4	Q96J92	1243 aa		32.1	■■■□□ 2.73
LIMD2-208	ENST00000579814	GPR75-ASB3	A0A0A6YYF3	556 aa		32.09	■■■□□ 2.73
LIMD2-208	ENST00000579814	RAB11FIP3	O75154	756 aa		32.09	■■■□□ 2.73
LIMD2-208	ENST00000579814	IDI2	Q9BXS1	227 aa		32.09	■■■□□ 2.73
LIMD2-208	ENST00000579814	IL1RAPL2	Q9NP60	686 aa		32.09	■■■□□ 2.73
LIMD2-208	ENST00000579814	FAM198A	Q9UFP1	575 aa		32.09	■■■□□ 2.73
LIMD2-208	ENST00000579814	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	MANSC4	A6NHS7	340 aa	Predicted RBP	32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	APBB1	O00213	710 aa		32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	INHBE	P58166	350 aa		32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	CLASRP	Q8N2M8	674 aa	Known RBP	32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	CSAD	Q9Y600	493 aa		32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	MYH13	Q9UKX3	1938 aa		32.08	■■■□□ 2.73
LIMD2-208	ENST00000579814	ENTPD3	O75355	529 aa		32.07	■■■□□ 2.72
LIMD2-208	ENST00000579814	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.07	■■■□□ 2.72
LIMD2-208	ENST00000579814	ZNF384	Q8TF68	577 aa		32.07	■■■□□ 2.72
LIMD2-208	ENST00000579814	ELP3	Q9H9T3	547 aa		32.07	■■■□□ 2.72
LIMD2-208	ENST00000579814	IGSF3	O75054	1194 aa		32.06	■■■□□ 2.72
LIMD2-208	ENST00000579814	CYP2E1	P05181	493 aa	Predicted RBP	32.06	■■■□□ 2.72
LIMD2-208	ENST00000579814	ZAP70	P43403	619 aa		32.06	■■■□□ 2.72
LIMD2-208	ENST00000579814	MAP4K4	O95819	1239 aa	Predicted RBP	32.05	■■■□□ 2.72
LIMD2-208	ENST00000579814	RGS3	P49796	1198 aa		32.05	■■■□□ 2.72
LIMD2-208	ENST00000579814	VGLL4	Q14135	290 aa		32.05	■■■□□ 2.72
LIMD2-208	ENST00000579814	MIGA2	Q7L4E1	593 aa		32.05	■■■□□ 2.72
LIMD2-208	ENST00000579814	ZNF341	Q9BYN7	854 aa		32.05	■■■□□ 2.72
LIMD2-208	ENST00000579814	NAA16	Q6N069	864 aa	Predicted RBP	32.04	■■■□□ 2.72
LIMD2-208	ENST00000579814	OPTN	Q96CV9	577 aa		32.04	■■■□□ 2.72
LIMD2-208	ENST00000579814	WRNIP1	Q96S55	665 aa		32.04	■■■□□ 2.72
LIMD2-208	ENST00000579814	NOL10	Q9BSC4	688 aa	Known RBP	32.04	■■■□□ 2.72
LIMD2-208	ENST00000579814	ZFPM1	Q8IX07	1006 aa		32.03	■■■□□ 2.72
LIMD2-208	ENST00000579814	WDHD1	O75717	1129 aa	Predicted RBP	32.02	■■■□□ 2.72
LIMD2-208	ENST00000579814	IFIT2	P09913	472 aa	Known RBP	32.02	■■■□□ 2.72
LIMD2-208	ENST00000579814	ALDH1A1	P00352	501 aa		32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	GJA5	P36382	358 aa		32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	RRP1	P56182	461 aa	Known RBP	32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	RHBDL3	P58872	404 aa		32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	BCL11A	Q9H165	835 aa		32.01	■■■□□ 2.71
LIMD2-208	ENST00000579814	BAG3	O95817	575 aa		32	■■■□□ 2.71
LIMD2-208	ENST00000579814	PICALM	Q13492	652 aa		32	■■■□□ 2.71
LIMD2-208	ENST00000579814	NPM3	O75607	178 aa	Known RBP	31.99	■■■□□ 2.71
LIMD2-208	ENST00000579814	ZKSCAN4	Q969J2	545 aa	Predicted RBP	31.99	■■■□□ 2.71
LIMD2-208	ENST00000579814	PIH1D3	Q9NQM4	214 aa	Known RBP	31.99	■■■□□ 2.71
LIMD2-208	ENST00000579814	TBC1D8	O95759	1140 aa		31.98	■■■□□ 2.71
LIMD2-208	ENST00000579814	OTUD7B	Q6GQQ9	843 aa		31.98	■■■□□ 2.71
LIMD2-208	ENST00000579814	IFNL1	Q8IU54	200 aa		31.98	■■■□□ 2.71
LIMD2-208	ENST00000579814	DDX4	Q9NQI0	724 aa	Known RBP	31.98	■■■□□ 2.71
LIMD2-208	ENST00000579814	ERO1B	Q86YB8	467 aa		31.97	■■■□□ 2.71
LIMD2-208	ENST00000579814	CNKSR2	Q8WXI2	1034 aa		31.97	■■■□□ 2.71
LIMD2-208	ENST00000579814	ZNF112	Q9UJU3	913 aa		31.97	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms