RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ZNF157P51786 506 aaPredicted RBP29.29■■■□□ 2.28
LIMD2-207ENST00000579329 CACNB3P54284 484 aa29.29■■■□□ 2.28
LIMD2-207ENST00000579329 TBC1D9Q6ZT07 1266 aa29.29■■■□□ 2.28
LIMD2-207ENST00000579329 MOB2Q70IA6 237 aa29.29■■■□□ 2.28
LIMD2-207ENST00000579329 SSC5DA1L4H1 1573 aa29.29■■■□□ 2.28
LIMD2-207ENST00000579329 UBE2Q2LH0YL09 131 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 MAP2K2P36507 400 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 MECOMQ03112 1051 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 NBPF12Q5TAG4 269 aaPredicted RBP29.28■■■□□ 2.28
LIMD2-207ENST00000579329 CCDC102AQ96A19 550 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 AKAP11Q9UKA4 1901 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 MYH2Q9UKX2 1941 aa29.28■■■□□ 2.28
LIMD2-207ENST00000579329 PRKG1Q13976 671 aa29.27■■■□□ 2.28
LIMD2-207ENST00000579329 CDC42EP5Q6NZY7 148 aa29.27■■■□□ 2.28
LIMD2-207ENST00000579329 FAM83AQ86UY5 434 aa29.27■■■□□ 2.28
LIMD2-207ENST00000579329 FAM163AQ96GL9 167 aaPredicted RBP29.27■■■□□ 2.28
LIMD2-207ENST00000579329 RAI14Q9P0K7 980 aa29.27■■■□□ 2.28
LIMD2-207ENST00000579329 LRP2BPQ9P2M1 347 aa29.27■■■□□ 2.28
LIMD2-207ENST00000579329 MROH7-TTC4A0A0A0MT08 1334 aa29.26■■■□□ 2.27
LIMD2-207ENST00000579329 PPP1R12BO60237 982 aaPredicted RBP29.26■■■□□ 2.27
LIMD2-207ENST00000579329 IFIT2P09913 472 aaKnown RBP29.26■■■□□ 2.27
LIMD2-207ENST00000579329 GSTO1P78417 241 aa29.26■■■□□ 2.27
LIMD2-207ENST00000579329 NOGQ13253 232 aa29.26■■■□□ 2.27
LIMD2-207ENST00000579329 TMEM39BQ9GZU3 492 aa29.26■■■□□ 2.27
LIMD2-207ENST00000579329 ANGEL1Q9UNK9 670 aaKnown RBP29.26■■■□□ 2.27
LIMD2-207ENST00000579329 ZAP70P43403 619 aa29.25■■■□□ 2.27
LIMD2-207ENST00000579329 NSUN4Q96CB9 384 aaKnown RBP29.25■■■□□ 2.27
LIMD2-207ENST00000579329 TEPSINQ96N21 525 aa29.25■■■□□ 2.27
LIMD2-207ENST00000579329 LRRCC1Q9C099 1032 aa29.25■■■□□ 2.27
LIMD2-207ENST00000579329 USP40Q9NVE5 1235 aa29.25■■■□□ 2.27
LIMD2-207ENST00000579329 PCDHB15Q9Y5E8 787 aa29.25■■■□□ 2.27
LIMD2-207ENST00000579329 FAM155AB1AL88 458 aaPredicted RBP29.24■■■□□ 2.27
LIMD2-207ENST00000579329 LDHCP07864 332 aa29.24■■■□□ 2.27
LIMD2-207ENST00000579329 SLC10A3P09131 477 aa29.24■■■□□ 2.27
LIMD2-207ENST00000579329 MAP3K11Q16584 847 aa29.24■■■□□ 2.27
LIMD2-207ENST00000579329 IGSF3O75054 1194 aa29.23■■■□□ 2.27
LIMD2-207ENST00000579329 CYP2E1P05181 493 aaPredicted RBP29.23■■■□□ 2.27
LIMD2-207ENST00000579329 RASAL3Q86YV0 1011 aa29.23■■■□□ 2.27
LIMD2-207ENST00000579329 ZNF384Q8TF68 577 aa29.23■■■□□ 2.27
LIMD2-207ENST00000579329 DCTPP1Q9H773 170 aa29.23■■■□□ 2.27
LIMD2-207ENST00000579329 MAST2Q6P0Q8 1798 aa29.23■■■□□ 2.27
LIMD2-207ENST00000579329 RPAP1Q9BWH6 1393 aaPredicted RBP29.23■■■□□ 2.27
LIMD2-207ENST00000579329 SLC34A2O95436 690 aa29.22■■■□□ 2.27
LIMD2-207ENST00000579329 BTDP43251 543 aa29.22■■■□□ 2.27
LIMD2-207ENST00000579329 BCL11AQ9H165 835 aa29.22■■■□□ 2.27
LIMD2-207ENST00000579329 FZD1Q9UP38 647 aa29.22■■■□□ 2.27
LIMD2-207ENST00000579329 MLLT1Q03111 559 aaPredicted RBP29.21■■■□□ 2.27
LIMD2-207ENST00000579329 LDLRAD1Q5T700 205 aa29.21■■■□□ 2.27
LIMD2-207ENST00000579329 CDAN1Q8IWY9 1227 aa29.21■■■□□ 2.27
LIMD2-207ENST00000579329 FAM151AQ8WW52 585 aa29.21■■■□□ 2.27
LIMD2-207ENST00000579329 GPR75-ASB3A0A0A6YYF3 556 aa29.2■■■□□ 2.26
LIMD2-207ENST00000579329 IREB2P48200 963 aaKnown RBP29.2■■■□□ 2.26
LIMD2-207ENST00000579329 PIH1D3Q9NQM4 214 aaKnown RBP29.2■■■□□ 2.26
LIMD2-207ENST00000579329 NFIAQ12857 509 aa29.19■■■□□ 2.26
LIMD2-207ENST00000579329 AAMPQ13685 434 aa29.19■■■□□ 2.26
LIMD2-207ENST00000579329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.19■■■□□ 2.26
LIMD2-207ENST00000579329 HOOK2Q96ED9 719 aa29.19■■■□□ 2.26
LIMD2-207ENST00000579329 UNCXA6NJT0 531 aa29.18■■■□□ 2.26
LIMD2-207ENST00000579329 CA12O43570 354 aa29.18■■■□□ 2.26
LIMD2-207ENST00000579329 USP2O75604 605 aaPredicted RBP29.18■■■□□ 2.26
LIMD2-207ENST00000579329 RGS19P49795 217 aa29.18■■■□□ 2.26
LIMD2-207ENST00000579329 NAA16Q6N069 864 aaPredicted RBP29.18■■■□□ 2.26
LIMD2-207ENST00000579329 IDI2Q9BXS1 227 aa29.18■■■□□ 2.26
LIMD2-207ENST00000579329 RFX7Q2KHR2 1363 aa29.17■■■□□ 2.26
LIMD2-207ENST00000579329 SMARCA5O60264 1052 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-207ENST00000579329 TCP10Q12799 353 aa29.17■■■□□ 2.26
LIMD2-207ENST00000579329 ZIC5Q96T25 663 aa29.17■■■□□ 2.26
LIMD2-207ENST00000579329 MCOLN1Q9GZU1 580 aa29.17■■■□□ 2.26
LIMD2-207ENST00000579329 FAM198AQ9UFP1 575 aa29.17■■■□□ 2.26
LIMD2-207ENST00000579329 MAP4K4O95819 1239 aaPredicted RBP29.16■■■□□ 2.26
LIMD2-207ENST00000579329 KIF23Q02241 960 aaPredicted RBP29.16■■■□□ 2.26
LIMD2-207ENST00000579329 NOL10Q9BSC4 688 aaKnown RBP29.16■■■□□ 2.26
LIMD2-207ENST00000579329 SUPT16HQ9Y5B9 1047 aaKnown RBP29.16■■■□□ 2.26
LIMD2-207ENST00000579329 NDUFB9Q9Y6M9 179 aa29.16■■■□□ 2.26
LIMD2-207ENST00000579329 ENTPD3O75355 529 aa29.15■■■□□ 2.26
LIMD2-207ENST00000579329 IDH1O75874 414 aaKnown RBP29.15■■■□□ 2.26
LIMD2-207ENST00000579329 RGS3P49796 1198 aa29.15■■■□□ 2.26
LIMD2-207ENST00000579329 RHBDL3P58872 404 aa29.15■■■□□ 2.26
LIMD2-207ENST00000579329 ANKRD13AQ8IZ07 590 aa29.15■■■□□ 2.26
LIMD2-207ENST00000579329 WDHD1O75717 1129 aaPredicted RBP29.14■■■□□ 2.26
LIMD2-207ENST00000579329 TTF1Q15361 905 aaPredicted RBP29.14■■■□□ 2.26
LIMD2-207ENST00000579329 DCAF15Q66K64 600 aa29.14■■■□□ 2.26
LIMD2-207ENST00000579329 ANTXR1Q9H6X2 564 aa29.14■■■□□ 2.26
LIMD2-207ENST00000579329 MYO5AQ9Y4I1 1855 aaKnown RBP29.13■■■□□ 2.25
LIMD2-207ENST00000579329 SLC10A4Q96EP9 437 aa29.13■■■□□ 2.25
LIMD2-207ENST00000579329 DOCK2Q92608 1830 aa29.13■■■□□ 2.25
LIMD2-207ENST00000579329 BAG3O95817 575 aa29.12■■■□□ 2.25
LIMD2-207ENST00000579329 ATP5JP18859 108 aa29.12■■■□□ 2.25
LIMD2-207ENST00000579329 MAP3K12Q12852 859 aa29.12■■■□□ 2.25
LIMD2-207ENST00000579329 REM2Q8IYK8 340 aaPredicted RBP29.12■■■□□ 2.25
LIMD2-207ENST00000579329 CLMNQ96JQ2 1002 aa29.12■■■□□ 2.25
LIMD2-207ENST00000579329 DNAJC2Q99543 621 aaKnown RBP29.12■■■□□ 2.25
LIMD2-207ENST00000579329 PICALMQ13492 652 aa29.11■■■□□ 2.25
LIMD2-207ENST00000579329 TMED8Q6PL24 325 aaPredicted RBP29.11■■■□□ 2.25
LIMD2-207ENST00000579329 OTOFQ9HC10 1997 aa29.11■■■□□ 2.25
LIMD2-207ENST00000579329 NPM3O75607 178 aaKnown RBP29.1■■■□□ 2.25
LIMD2-207ENST00000579329 PLCG2P16885 1265 aa29.1■■■□□ 2.25
LIMD2-207ENST00000579329 CYP7A1P22680 504 aa29.1■■■□□ 2.25
LIMD2-207ENST00000579329 MAP3K9P80192 1104 aa29.1■■■□□ 2.25
LIMD2-207ENST00000579329 HDAC1Q13547 482 aaPredicted RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms