RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 RBM19Q9Y4C8 960 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
CSNK1D-209ENST00000578904 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 POTECB2RU33 542 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 CERS3Q8IU89 383 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 MROH7-TTC4A0A0A0MT08 1334 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 ZNF532Q9HCE3 1301 aa16.67■□□□□ 0.26
CSNK1D-209ENST00000578904 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 EGFRP00533 1210 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 GNAT2P19087 354 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 CYP7A1P22680 504 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 HHIPL2Q6UWX4 724 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 AIDAQ96BJ3 306 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 GAKO14976 1311 aa16.66■□□□□ 0.26
CSNK1D-209ENST00000578904 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 PNMA8AQ86V59 439 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
CSNK1D-209ENST00000578904 WNT10BO00744 389 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 MYO1BO43795 1136 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 BTDP43251 543 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 ANAPC15P60006 121 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
CSNK1D-209ENST00000578904 BAG3O95817 575 aa16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 APLP1P51693 650 aa16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 NBPF9Q3BBW0 867 aa16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 LSG1Q9H089 658 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 RPAP1Q9BWH6 1393 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-209ENST00000578904 MAGEB6P1A0A0J9YX57 407 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 GPAA1O43292 621 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 CHGBP05060 677 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 NACAP1Q9BZK3 213 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 AATFQ9NY61 560 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
CSNK1D-209ENST00000578904 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 KIF3CO14782 793 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 PLCG2P16885 1265 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 HSPA4P34932 840 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 SLFNL1Q499Z3 407 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 TDRD3Q9H7E2 651 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-209ENST00000578904 M0R2C6 588 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 KRT32Q14532 448 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 ANGEL2Q5VTE6 544 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-209ENST00000578904 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 APPP05067 770 aa16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 HSPD1P10809 573 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 DYNLL1P63167 89 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 RABEP1Q15276 862 aa16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 CCDC129Q6ZRS4 1044 aa16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 ZC3H15Q8WU90 426 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-209ENST00000578904 IL25Q9H293 177 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms