RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 MIGA2Q7L4E1 593 aa26.3■■□□□ 1.8
TSEN54-205ENST00000578415 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
TSEN54-205ENST00000578415 WDHD1O75717 1129 aaPredicted RBP26.29■■□□□ 1.8
TSEN54-205ENST00000578415 INPP5BP32019 993 aa26.29■■□□□ 1.8
TSEN54-205ENST00000578415 WDR66Q8TBY9 1149 aa26.29■■□□□ 1.8
TSEN54-205ENST00000578415 LPIN2Q92539 896 aa26.29■■□□□ 1.8
TSEN54-205ENST00000578415 ZNF341Q9BYN7 854 aa26.29■■□□□ 1.8
TSEN54-205ENST00000578415 SLC5A1P13866 664 aa26.28■■□□□ 1.8
TSEN54-205ENST00000578415 ATG9AQ7Z3C6 839 aa26.28■■□□□ 1.8
TSEN54-205ENST00000578415 SH3TC2Q8TF17 1288 aa26.28■■□□□ 1.8
TSEN54-205ENST00000578415 DAGLAQ9Y4D2 1042 aa26.28■■□□□ 1.8
TSEN54-205ENST00000578415 ZSWIM8A7E2V4 1837 aa26.28■■□□□ 1.8
TSEN54-205ENST00000578415 MYCP01106 439 aaPredicted RBP26.27■■□□□ 1.8
TSEN54-205ENST00000578415 PPATQ06203 517 aa26.27■■□□□ 1.8
TSEN54-205ENST00000578415 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.27■■□□□ 1.8
TSEN54-205ENST00000578415 FAM151AQ8WW52 585 aa26.27■■□□□ 1.8
TSEN54-205ENST00000578415 KIF22Q14807 665 aa26.26■■□□□ 1.79
TSEN54-205ENST00000578415 DIXDC1Q155Q3 683 aa26.26■■□□□ 1.79
TSEN54-205ENST00000578415 SLC4A8Q2Y0W8 1093 aa26.26■■□□□ 1.79
TSEN54-205ENST00000578415 C17orf99Q6UX52 265 aa26.26■■□□□ 1.79
TSEN54-205ENST00000578415 ZNF112Q9UJU3 913 aa26.26■■□□□ 1.79
TSEN54-205ENST00000578415 E9PSI1 815 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 CTGFP29279 349 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 PRDX5P30044 214 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 TCP10Q12799 353 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 NFIAQ12857 509 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 CDC42EP5Q6NZY7 148 aa26.25■■□□□ 1.79
TSEN54-205ENST00000578415 GNRH1P01148 92 aa26.24■■□□□ 1.79
TSEN54-205ENST00000578415 ANKRD23Q86SG2 305 aa26.24■■□□□ 1.79
TSEN54-205ENST00000578415 KCNH4Q9UQ05 1017 aa26.24■■□□□ 1.79
TSEN54-205ENST00000578415 ADGRA2Q96PE1 1338 aa26.23■■□□□ 1.79
TSEN54-205ENST00000578415 CPA4Q9UI42 421 aa26.23■■□□□ 1.79
TSEN54-205ENST00000578415 ECM2O94769 699 aaPredicted RBP26.22■■□□□ 1.79
TSEN54-205ENST00000578415 ZEB1P37275 1124 aaPredicted RBP26.22■■□□□ 1.79
TSEN54-205ENST00000578415 MOGSQ13724 837 aa26.22■■□□□ 1.79
TSEN54-205ENST00000578415 FAM198AQ9UFP1 575 aa26.22■■□□□ 1.79
TSEN54-205ENST00000578415 PDHXO00330 501 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 PRMT2P55345 433 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 SLFN5Q08AF3 891 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 ATP2B3Q16720 1220 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 NOL9Q5SY16 702 aaKnown RBP26.21■■□□□ 1.79
TSEN54-205ENST00000578415 TRIM47Q96LD4 638 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 SIL1Q9H173 461 aa26.21■■□□□ 1.79
TSEN54-205ENST00000578415 ZFPM1Q8IX07 1006 aa26.2■■□□□ 1.78
TSEN54-205ENST00000578415 CIAO1O76071 339 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 LDHBP07195 334 aaKnown RBP26.19■■□□□ 1.78
TSEN54-205ENST00000578415 PSMC4P43686 418 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 ALDH1L2Q3SY69 923 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 USP40Q9NVE5 1235 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 SRRDQ9UH36 339 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 FBXO3Q9UK99 471 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 ATRNL1Q5VV63 1379 aa26.19■■□□□ 1.78
TSEN54-205ENST00000578415 SALL1Q9NSC2 1324 aa26.18■■□□□ 1.78
TSEN54-205ENST00000578415 PHKA1P46020 1223 aa26.18■■□□□ 1.78
TSEN54-205ENST00000578415 FXR1P51114 621 aaKnown RBP eCLIP26.18■■□□□ 1.78
TSEN54-205ENST00000578415 MTFR1Q15390 333 aa26.18■■□□□ 1.78
TSEN54-205ENST00000578415 GNL3LQ9NVN8 582 aaKnown RBP26.18■■□□□ 1.78
TSEN54-205ENST00000578415 CEP126Q9P2H0 1117 aa26.18■■□□□ 1.78
TSEN54-205ENST00000578415 MYH13Q9UKX3 1938 aa26.18■■□□□ 1.78
TSEN54-205ENST00000578415 UBTFL1P0CB47 393 aaPredicted RBP26.17■■□□□ 1.78
TSEN54-205ENST00000578415 OSBPP22059 807 aa26.17■■□□□ 1.78
TSEN54-205ENST00000578415 SHISA4Q96DD7 197 aa26.17■■□□□ 1.78
TSEN54-205ENST00000578415 SMC4Q9NTJ3 1288 aa26.17■■□□□ 1.78
TSEN54-205ENST00000578415 COLQQ9Y215 455 aaPredicted RBP26.17■■□□□ 1.78
TSEN54-205ENST00000578415 GPAT2Q6NUI2 795 aa26.16■■□□□ 1.78
TSEN54-205ENST00000578415 DENND2AQ9ULE3 1009 aa26.16■■□□□ 1.78
TSEN54-205ENST00000578415 SEMA3EO15041 775 aa26.15■■□□□ 1.78
TSEN54-205ENST00000578415 CDCA7LQ96GN5 454 aa26.15■■□□□ 1.78
TSEN54-205ENST00000578415 PA2G4Q9UQ80 394 aaKnown RBP26.15■■□□□ 1.78
TSEN54-205ENST00000578415 PHF20L1A8MW92 1017 aa26.14■■□□□ 1.78
TSEN54-205ENST00000578415 CXCL11O14625 94 aa26.14■■□□□ 1.78
TSEN54-205ENST00000578415 ZBTB22O15209 634 aa26.14■■□□□ 1.78
TSEN54-205ENST00000578415 FMNL1O95466 1100 aaPredicted RBP26.14■■□□□ 1.78
TSEN54-205ENST00000578415 ADORA1P30542 326 aa26.14■■□□□ 1.78
TSEN54-205ENST00000578415 RFX7Q2KHR2 1363 aa26.14■■□□□ 1.78
TSEN54-205ENST00000578415 H0YGN5 161 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 CYP2C8P10632 490 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 BCRP11274 1271 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 HOXD10P28358 340 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 GRK4P32298 578 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 IL15P40933 162 aaPredicted RBP26.13■■□□□ 1.77
TSEN54-205ENST00000578415 RGS3P49796 1198 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 RAET1EQ8TD07 263 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 PARK7Q99497 189 aaKnown RBP26.13■■□□□ 1.77
TSEN54-205ENST00000578415 IDI2Q9BXS1 227 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 LRRFIP2Q9Y608 721 aaKnown RBP26.13■■□□□ 1.77
TSEN54-205ENST00000578415 GAKO14976 1311 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 MYPNQ86TC9 1320 aa26.13■■□□□ 1.77
TSEN54-205ENST00000578415 CCDC102BQ68D86 513 aa26.12■■□□□ 1.77
TSEN54-205ENST00000578415 SH3BP5LQ7L8J4 393 aa26.12■■□□□ 1.77
TSEN54-205ENST00000578415 ENTPD3O75355 529 aa26.11■■□□□ 1.77
TSEN54-205ENST00000578415 ZHX2Q9Y6X8 837 aa26.11■■□□□ 1.77
TSEN54-205ENST00000578415 CEP290O15078 2479 aa26.11■■□□□ 1.77
TSEN54-205ENST00000578415 A0A0G2JLL6 359 aaPredicted RBP26.1■■□□□ 1.77
TSEN54-205ENST00000578415 PRKCZQ05513 592 aa26.1■■□□□ 1.77
TSEN54-205ENST00000578415 RASGRF1Q13972 1273 aa26.1■■□□□ 1.77
TSEN54-205ENST00000578415 PRRT2Q7Z6L0 340 aaPredicted RBP26.1■■□□□ 1.77
TSEN54-205ENST00000578415 TRMT2AQ8IZ69 625 aaKnown RBP26.1■■□□□ 1.77
TSEN54-205ENST00000578415 SCYL3Q8IZE3 742 aa26.1■■□□□ 1.77
TSEN54-205ENST00000578415 COPRSQ9NQ92 184 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms