RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 SREBF2Q12772 1141 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 DGKZQ13574 1117 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 TNNI3KQ59H18 835 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 SPATA5Q8NB90 893 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 WNK4Q96J92 1243 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 FPGT-TNNI3KV9GXZ4 949 aa28.29■■■□□ 2.12
VAPA-205ENST00000578314 GAKO14976 1311 aa28.28■■■□□ 2.12
VAPA-205ENST00000578314 UQCRFS1P1P0C7P4 283 aa28.28■■■□□ 2.12
VAPA-205ENST00000578314 FAM151AQ8WW52 585 aa28.28■■■□□ 2.12
VAPA-205ENST00000578314 INHBEP58166 350 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 SLF2Q8IX21 1173 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 HOOK2Q96ED9 719 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 USP40Q9NVE5 1235 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 DDX19BQ9UMR2 479 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 MYH13Q9UKX3 1938 aa28.27■■■□□ 2.12
VAPA-205ENST00000578314 RPAP1Q9BWH6 1393 aaPredicted RBP28.26■■■□□ 2.12
VAPA-205ENST00000578314 MANSC4A6NHS7 340 aaPredicted RBP28.26■■■□□ 2.11
VAPA-205ENST00000578314 CCDC85CA6NKD9 419 aa28.26■■■□□ 2.11
VAPA-205ENST00000578314 MAP3K9P80192 1104 aa28.26■■■□□ 2.11
VAPA-205ENST00000578314 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.26■■■□□ 2.11
VAPA-205ENST00000578314 DZIP1Q86YF9 867 aaKnown RBP28.26■■■□□ 2.11
VAPA-205ENST00000578314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.26■■■□□ 2.11
VAPA-205ENST00000578314 PI16Q6UXB8 463 aa28.25■■■□□ 2.11
VAPA-205ENST00000578314 ERICH6Q7L0X2 663 aa28.25■■■□□ 2.11
VAPA-205ENST00000578314 DBNDD2Q9BQY9 259 aa28.25■■■□□ 2.11
VAPA-205ENST00000578314 ZBTB40Q9NUA8 1239 aa28.25■■■□□ 2.11
VAPA-205ENST00000578314 COG6Q9Y2V7 657 aa28.25■■■□□ 2.11
VAPA-205ENST00000578314 GJA5P36382 358 aa28.24■■■□□ 2.11
VAPA-205ENST00000578314 MCAMP43121 646 aa28.24■■■□□ 2.11
VAPA-205ENST00000578314 NFIAQ12857 509 aa28.24■■■□□ 2.11
VAPA-205ENST00000578314 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.24■■■□□ 2.11
VAPA-205ENST00000578314 FAM198AQ9UFP1 575 aa28.24■■■□□ 2.11
VAPA-205ENST00000578314 MECOMQ03112 1051 aa28.23■■■□□ 2.11
VAPA-205ENST00000578314 CCDC158Q5M9N0 1113 aa28.23■■■□□ 2.11
VAPA-205ENST00000578314 RPAP2Q8IXW5 612 aaPredicted RBP28.23■■■□□ 2.11
VAPA-205ENST00000578314 ZNF384Q8TF68 577 aa28.23■■■□□ 2.11
VAPA-205ENST00000578314 ZNF512BQ96KM6 892 aaPredicted RBP28.23■■■□□ 2.11
VAPA-205ENST00000578314 CFHR5Q9BXR6 569 aa28.23■■■□□ 2.11
VAPA-205ENST00000578314 IDI2Q9BXS1 227 aa28.23■■■□□ 2.11
VAPA-205ENST00000578314 TBC1D9Q6ZT07 1266 aa28.22■■■□□ 2.11
VAPA-205ENST00000578314 CHMP4BQ9H444 224 aaKnown RBP28.22■■■□□ 2.11
VAPA-205ENST00000578314 ELP3Q9H9T3 547 aa28.22■■■□□ 2.11
VAPA-205ENST00000578314 TCP10Q12799 353 aa28.21■■■□□ 2.11
VAPA-205ENST00000578314 VGLL4Q14135 290 aa28.21■■■□□ 2.11
VAPA-205ENST00000578314 PDE3AQ14432 1141 aa28.21■■■□□ 2.11
VAPA-205ENST00000578314 DCAF15Q66K64 600 aa28.21■■■□□ 2.11
VAPA-205ENST00000578314 NSUN4Q96CB9 384 aaKnown RBP28.21■■■□□ 2.11
VAPA-205ENST00000578314 EAF2Q96CJ1 260 aaPredicted RBP28.21■■■□□ 2.11
VAPA-205ENST00000578314 MROH7-TTC4A0A0A0MT08 1334 aa28.2■■■□□ 2.11
VAPA-205ENST00000578314 GPR75-ASB3A0A0A6YYF3 556 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 TBC1D8O95759 1140 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 ALDH1A1P00352 501 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 NOM1Q5C9Z4 860 aaKnown RBP28.2■■■□□ 2.1
VAPA-205ENST00000578314 TTC39AQ5SRH9 613 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 IFNL1Q8IU54 200 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 ERC1Q8IUD2 1116 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 OPTNQ96CV9 577 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 DBNLQ9UJU6 430 aaKnown RBP28.2■■■□□ 2.1
VAPA-205ENST00000578314 EXOC6BQ9Y2D4 811 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 CSADQ9Y600 493 aa28.2■■■□□ 2.1
VAPA-205ENST00000578314 TESPA1A2RU30 521 aaPredicted RBP28.19■■■□□ 2.1
VAPA-205ENST00000578314 ENTPD3O75355 529 aa28.19■■■□□ 2.1
VAPA-205ENST00000578314 LDHCP07864 332 aa28.19■■■□□ 2.1
VAPA-205ENST00000578314 BTDP43251 543 aa28.19■■■□□ 2.1
VAPA-205ENST00000578314 GSTO1P78417 241 aa28.19■■■□□ 2.1
VAPA-205ENST00000578314 HSP90AB4PQ58FF6 505 aa28.18■■■□□ 2.1
VAPA-205ENST00000578314 ZFPM1Q8IX07 1006 aa28.18■■■□□ 2.1
VAPA-205ENST00000578314 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.18■■■□□ 2.1
VAPA-205ENST00000578314 WRNIP1Q96S55 665 aa28.18■■■□□ 2.1
VAPA-205ENST00000578314 ZNF341Q9BYN7 854 aa28.18■■■□□ 2.1
VAPA-205ENST00000578314 RFX7Q2KHR2 1363 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 RGS3P49796 1198 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 MIGA2Q7L4E1 593 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 SIRT2Q8IXJ6 389 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 CCDC8Q9H0W5 538 aaPredicted RBP28.17■■■□□ 2.1
VAPA-205ENST00000578314 SNRKQ9NRH2 765 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 RAI14Q9P0K7 980 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 ZNF112Q9UJU3 913 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 SNCAIPQ9Y6H5 919 aa28.17■■■□□ 2.1
VAPA-205ENST00000578314 IGF2BP3O00425 579 aaKnown RBP eCLIP28.16■■■□□ 2.1
VAPA-205ENST00000578314 WDHD1O75717 1129 aaPredicted RBP28.16■■■□□ 2.1
VAPA-205ENST00000578314 MAP4K4O95819 1239 aaPredicted RBP28.16■■■□□ 2.1
VAPA-205ENST00000578314 RHBDL3P58872 404 aa28.16■■■□□ 2.1
VAPA-205ENST00000578314 C20orf194Q5TEA3 1177 aa28.16■■■□□ 2.1
VAPA-205ENST00000578314 CNKSR2Q8WXI2 1034 aa28.16■■■□□ 2.1
VAPA-205ENST00000578314 ZKSCAN4Q969J2 545 aaPredicted RBP28.16■■■□□ 2.1
VAPA-205ENST00000578314 MS4A4AQ96JQ5 239 aa28.16■■■□□ 2.1
VAPA-205ENST00000578314 TLR7Q9NYK1 1049 aaKnown RBP28.16■■■□□ 2.1
VAPA-205ENST00000578314 LRP2BPQ9P2M1 347 aa28.16■■■□□ 2.1
VAPA-205ENST00000578314 SPDYE5A6NIY4 337 aa28.15■■■□□ 2.1
VAPA-205ENST00000578314 IGSF3O75054 1194 aa28.15■■■□□ 2.1
VAPA-205ENST00000578314 HMMRO75330 724 aa28.15■■■□□ 2.1
VAPA-205ENST00000578314 CYP2E1P05181 493 aaPredicted RBP28.15■■■□□ 2.1
VAPA-205ENST00000578314 CTU1Q7Z7A3 348 aaKnown RBP28.15■■■□□ 2.1
VAPA-205ENST00000578314 LAMB1P07942 1786 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 GPR25O00155 361 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 NPM3O75607 178 aaKnown RBP28.14■■■□□ 2.1
VAPA-205ENST00000578314 OTUD7BQ6GQQ9 843 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 RHPN1Q8TCX5 695 aa28.14■■■□□ 2.1
VAPA-205ENST00000578314 ZNF296Q8WUU4 475 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms