RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MOB2Q70IA6 237 aa28.23■■■□□ 2.11
LIMD2-204ENST00000578297 TEPSINQ96N21 525 aa28.23■■■□□ 2.11
LIMD2-204ENST00000578297 LDHCP07864 332 aa28.22■■■□□ 2.11
LIMD2-204ENST00000578297 TTLL12Q14166 644 aaPredicted RBP28.22■■■□□ 2.11
LIMD2-204ENST00000578297 ARMC9Q7Z3E5 817 aa28.22■■■□□ 2.11
LIMD2-204ENST00000578297 TMEM39BQ9GZU3 492 aa28.22■■■□□ 2.11
LIMD2-204ENST00000578297 USP40Q9NVE5 1235 aa28.22■■■□□ 2.11
LIMD2-204ENST00000578297 SSC5DA1L4H1 1573 aa28.21■■■□□ 2.11
LIMD2-204ENST00000578297 SMARCA5O60264 1052 aaPredicted RBP28.21■■■□□ 2.11
LIMD2-204ENST00000578297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.21■■■□□ 2.11
LIMD2-204ENST00000578297 BCL11AQ9H165 835 aa28.21■■■□□ 2.11
LIMD2-204ENST00000578297 GPR75-ASB3A0A0A6YYF3 556 aa28.2■■■□□ 2.1
LIMD2-204ENST00000578297 UBE2Q2LH0YL09 131 aa28.2■■■□□ 2.1
LIMD2-204ENST00000578297 ZNF157P51786 506 aaPredicted RBP28.2■■■□□ 2.1
LIMD2-204ENST00000578297 GRM1Q13255 1194 aa28.2■■■□□ 2.1
LIMD2-204ENST00000578297 PIH1D3Q9NQM4 214 aaKnown RBP28.2■■■□□ 2.1
LIMD2-204ENST00000578297 PPP1R12BO60237 982 aaPredicted RBP28.19■■■□□ 2.1
LIMD2-204ENST00000578297 BTDP43251 543 aa28.19■■■□□ 2.1
LIMD2-204ENST00000578297 PRKG1Q13976 671 aa28.19■■■□□ 2.1
LIMD2-204ENST00000578297 MAP3K11Q16584 847 aa28.19■■■□□ 2.1
LIMD2-204ENST00000578297 CCDC102AQ96A19 550 aa28.19■■■□□ 2.1
LIMD2-204ENST00000578297 THSD7BQ9C0I4 1608 aa28.18■■■□□ 2.1
LIMD2-204ENST00000578297 MAP2K2P36507 400 aa28.18■■■□□ 2.1
LIMD2-204ENST00000578297 HDAC1Q13547 482 aaPredicted RBP28.18■■■□□ 2.1
LIMD2-204ENST00000578297 EXOC6Q8TAG9 804 aa28.18■■■□□ 2.1
LIMD2-204ENST00000578297 FAM151AQ8WW52 585 aa28.18■■■□□ 2.1
LIMD2-204ENST00000578297 ANGEL1Q9UNK9 670 aaKnown RBP28.18■■■□□ 2.1
LIMD2-204ENST00000578297 NDUFB9Q9Y6M9 179 aa28.18■■■□□ 2.1
LIMD2-204ENST00000578297 FAM155AB1AL88 458 aaPredicted RBP28.17■■■□□ 2.1
LIMD2-204ENST00000578297 NFIAQ12857 509 aa28.17■■■□□ 2.1
LIMD2-204ENST00000578297 LDLRAD1Q5T700 205 aa28.17■■■□□ 2.1
LIMD2-204ENST00000578297 NAA16Q6N069 864 aaPredicted RBP28.17■■■□□ 2.1
LIMD2-204ENST00000578297 CDAN1Q8IWY9 1227 aa28.17■■■□□ 2.1
LIMD2-204ENST00000578297 IDI2Q9BXS1 227 aa28.17■■■□□ 2.1
LIMD2-204ENST00000578297 MYO5AQ9Y4I1 1855 aaKnown RBP28.17■■■□□ 2.1
LIMD2-204ENST00000578297 MAST2Q6P0Q8 1798 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 RPAP1Q9BWH6 1393 aaPredicted RBP28.16■■■□□ 2.1
LIMD2-204ENST00000578297 AOC2O75106 756 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 MAP4K4O95819 1239 aaPredicted RBP28.16■■■□□ 2.1
LIMD2-204ENST00000578297 ATP5JP18859 108 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 NOGQ13253 232 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 ANTXR1Q9H6X2 564 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 FAM198AQ9UFP1 575 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 FZD1Q9UP38 647 aa28.16■■■□□ 2.1
LIMD2-204ENST00000578297 UNCXA6NJT0 531 aa28.15■■■□□ 2.1
LIMD2-204ENST00000578297 USP2O75604 605 aaPredicted RBP28.15■■■□□ 2.1
LIMD2-204ENST00000578297 SLC10A3P09131 477 aa28.15■■■□□ 2.1
LIMD2-204ENST00000578297 RHBDL3P58872 404 aa28.14■■■□□ 2.1
LIMD2-204ENST00000578297 MAP2K1Q02750 393 aaPredicted RBP28.14■■■□□ 2.1
LIMD2-204ENST00000578297 TTF1Q15361 905 aaPredicted RBP28.14■■■□□ 2.1
LIMD2-204ENST00000578297 HOOK2Q96ED9 719 aa28.14■■■□□ 2.1
LIMD2-204ENST00000578297 RFX7Q2KHR2 1363 aa28.13■■■□□ 2.09
LIMD2-204ENST00000578297 WDHD1O75717 1129 aaPredicted RBP28.13■■■□□ 2.09
LIMD2-204ENST00000578297 IDH1O75874 414 aaKnown RBP28.13■■■□□ 2.09
LIMD2-204ENST00000578297 IREB2P48200 963 aaKnown RBP28.13■■■□□ 2.09
LIMD2-204ENST00000578297 TCP10Q12799 353 aa28.13■■■□□ 2.09
LIMD2-204ENST00000578297 TMED8Q6PL24 325 aaPredicted RBP28.13■■■□□ 2.09
LIMD2-204ENST00000578297 RASAL3Q86YV0 1011 aa28.13■■■□□ 2.09
LIMD2-204ENST00000578297 GCC1Q96CN9 775 aa28.13■■■□□ 2.09
LIMD2-204ENST00000578297 DOCK2Q92608 1830 aa28.13■■■□□ 2.09
LIMD2-204ENST00000578297 ENTPD3O75355 529 aa28.12■■■□□ 2.09
LIMD2-204ENST00000578297 HSPA1AP0DMV8 641 aaKnown RBP28.12■■■□□ 2.09
LIMD2-204ENST00000578297 HSPA1BP0DMV9 641 aaKnown RBP28.12■■■□□ 2.09
LIMD2-204ENST00000578297 MAP3K12Q12852 859 aa28.12■■■□□ 2.09
LIMD2-204ENST00000578297 NOL10Q9BSC4 688 aaKnown RBP28.12■■■□□ 2.09
LIMD2-204ENST00000578297 BOLA2Q9H3K6 86 aa28.12■■■□□ 2.09
LIMD2-204ENST00000578297 WBP1LQ9NX94 342 aa28.12■■■□□ 2.09
LIMD2-204ENST00000578297 BAG3O95817 575 aa28.11■■■□□ 2.09
LIMD2-204ENST00000578297 RGS3P49796 1198 aa28.11■■■□□ 2.09
LIMD2-204ENST00000578297 PPP4CP60510 307 aa28.11■■■□□ 2.09
LIMD2-204ENST00000578297 DNAJC2Q99543 621 aaKnown RBP28.11■■■□□ 2.09
LIMD2-204ENST00000578297 HAUS7Q99871 368 aa28.11■■■□□ 2.09
LIMD2-204ENST00000578297 NPM3O75607 178 aaKnown RBP28.1■■■□□ 2.09
LIMD2-204ENST00000578297 ADGRA1Q86SQ6 560 aa28.1■■■□□ 2.09
LIMD2-204ENST00000578297 ZFPM1Q8IX07 1006 aa28.1■■■□□ 2.09
LIMD2-204ENST00000578297 ECHDC1Q9NTX5 307 aa28.1■■■□□ 2.09
LIMD2-204ENST00000578297 GOLIM4O00461 696 aa28.09■■■□□ 2.09
LIMD2-204ENST00000578297 CYP7A1P22680 504 aa28.09■■■□□ 2.09
LIMD2-204ENST00000578297 ANKRD13AQ8IZ07 590 aa28.09■■■□□ 2.09
LIMD2-204ENST00000578297 GPATCH3Q96I76 525 aa28.09■■■□□ 2.09
LIMD2-204ENST00000578297 ZIC5Q96T25 663 aa28.09■■■□□ 2.09
LIMD2-204ENST00000578297 RWDD1Q9H446 243 aaPredicted RBP28.09■■■□□ 2.09
LIMD2-204ENST00000578297 DDX4Q9NQI0 724 aaKnown RBP28.09■■■□□ 2.09
LIMD2-204ENST00000578297 PLCG2P16885 1265 aa28.08■■■□□ 2.09
LIMD2-204ENST00000578297 MAGEB6Q8N7X4 407 aa28.08■■■□□ 2.09
LIMD2-204ENST00000578297 SLC10A4Q96EP9 437 aa28.08■■■□□ 2.09
LIMD2-204ENST00000578297 PAG1Q9NWQ8 432 aa28.08■■■□□ 2.09
LIMD2-204ENST00000578297 AATFQ9NY61 560 aaKnown RBP eCLIP28.08■■■□□ 2.09
LIMD2-204ENST00000578297 PICALMQ13492 652 aa28.07■■■□□ 2.08
LIMD2-204ENST00000578297 DCAF15Q66K64 600 aa28.07■■■□□ 2.08
LIMD2-204ENST00000578297 SH3RF3Q8TEJ3 882 aaPredicted RBP28.07■■■□□ 2.08
LIMD2-204ENST00000578297 AK9Q5TCS8 1911 aa28.06■■■□□ 2.08
LIMD2-204ENST00000578297 KIF23Q02241 960 aaPredicted RBP28.06■■■□□ 2.08
LIMD2-204ENST00000578297 TEX11Q8IYF3 940 aa28.06■■■□□ 2.08
LIMD2-204ENST00000578297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.06■■■□□ 2.08
LIMD2-204ENST00000578297 EDC3Q96F86 508 aaKnown RBP28.06■■■□□ 2.08
LIMD2-204ENST00000578297 CLMNQ96JQ2 1002 aa28.06■■■□□ 2.08
LIMD2-204ENST00000578297 MAP3K9P80192 1104 aa28.05■■■□□ 2.08
LIMD2-204ENST00000578297 ANKRD45Q5TZF3 282 aa28.05■■■□□ 2.08
LIMD2-204ENST00000578297 SH3BP5LQ7L8J4 393 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms