RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 BCL9LQ86UU0 1499 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 ZNF804BA4D1E1 1349 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 ZNF532Q9HCE3 1301 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 MYH14Q7Z406 1995 aaKnown RBP9.67□□□□□ -0.86
SKA2-203ENST00000578105 MYH15Q9Y2K3 1946 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 PRC1O43663 620 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 TPM3P06753 285 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 LIFRP42702 1097 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 STK3Q13188 491 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 SCARF1Q14162 830 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 RBM43Q6ZSC3 357 aaKnown RBP9.67□□□□□ -0.86
SKA2-203ENST00000578105 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 LEO1Q8WVC0 666 aaPredicted RBP9.67□□□□□ -0.86
SKA2-203ENST00000578105 STRBPQ96SI9 672 aaKnown RBP9.67□□□□□ -0.86
SKA2-203ENST00000578105 NUP62CLQ9H1M0 184 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
SKA2-203ENST00000578105 ANGEL1Q9UNK9 670 aaKnown RBP9.67□□□□□ -0.86
SKA2-203ENST00000578105 FOXP2O15409 715 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 IDH1O75874 414 aaKnown RBP9.66□□□□□ -0.86
SKA2-203ENST00000578105 MSNP26038 577 aaKnown RBP9.66□□□□□ -0.86
SKA2-203ENST00000578105 PHKA1P46020 1223 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 APOBRQ0VD83 1088 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 SART3Q15020 963 aaKnown RBP9.66□□□□□ -0.86
SKA2-203ENST00000578105 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 GIMAP6Q6P9H5 292 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 ADGRD1Q6QNK2 874 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 TTC6Q86TZ1 520 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 WASF1Q92558 559 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.869e-7■■■■□ 21.9
SKA2-203ENST00000578105 ACSBG1Q96GR2 724 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 TCEANC2Q96MN5 208 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 CCDC85AQ96PX6 553 aaPredicted RBP9.66□□□□□ -0.86
SKA2-203ENST00000578105 FUCA2Q9BTY2 467 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 ANKRD2Q9GZV1 360 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 PIH1D3Q9NQM4 214 aaKnown RBP9.66□□□□□ -0.86
SKA2-203ENST00000578105 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
SKA2-203ENST00000578105 STK36Q9NRP7 1315 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
SKA2-203ENST00000578105 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
SKA2-203ENST00000578105 CPLX1O14810 134 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 YEATS4O95619 227 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 CHRNDQ07001 517 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 RASGRF1Q13972 1273 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
SKA2-203ENST00000578105 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 NAPBQ9H115 298 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 USP25Q9UHP3 1055 aa9.65□□□□□ -0.86
SKA2-203ENST00000578105 NOL7Q9UMY1 257 aaKnown RBP9.65□□□□□ -0.86
SKA2-203ENST00000578105 A0A1B0GUL6 1792 aa9.65□□□□□ -0.87
SKA2-203ENST00000578105 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 CCDC196A0A1B0GTZ2 297 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 SH2B2O14492 632 aaPredicted RBP9.64□□□□□ -0.87
SKA2-203ENST00000578105 JAK2O60674 1132 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 CTDNEP1O95476 244 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
SKA2-203ENST00000578105 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 SYNE3Q6ZMZ3 975 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 KCNG4Q8TDN1 519 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 STAG1Q8WVM7 1258 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 C8orf76Q96K31 380 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 CLSTN2Q9H4D0 955 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 RTEL1Q9NZ71 1219 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 LY75O60449 1722 aa9.64□□□□□ -0.87
SKA2-203ENST00000578105 ERICH2A1L162 156 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 GOLGA8BA8MQT2 603 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 ZNF500O60304 480 aaPredicted RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 ZPR1O75312 459 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 CHGBP05060 677 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 APPP05067 770 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 AKNAD1Q5T1N1 836 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 TTLL5Q6EMB2 1281 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 MFSD6Q6ZSS7 791 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 FERMT3Q86UX7 667 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 BICD2Q8TD16 824 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 SETDB2Q96T68 719 aa9.63□□□□□ -0.87
SKA2-203ENST00000578105 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
SKA2-203ENST00000578105 TNMDQ9H2S6 317 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms