RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SGPL1O95470 568 aa20.65■□□□□ 0.9
CTDNEP1-211ENST00000575783 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
CTDNEP1-211ENST00000575783 INPP5BP32019 993 aa20.65■□□□□ 0.9
CTDNEP1-211ENST00000575783 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
CTDNEP1-211ENST00000575783 ZNF341Q9BYN7 854 aa20.65■□□□□ 0.9
CTDNEP1-211ENST00000575783 FCGRTP55899 365 aa20.64■□□□□ 0.89
CTDNEP1-211ENST00000575783 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.89
CTDNEP1-211ENST00000575783 FAM83AQ86UY5 434 aa20.64■□□□□ 0.89
CTDNEP1-211ENST00000575783 GABRQQ9UN88 632 aa20.64■□□□□ 0.89
CTDNEP1-211ENST00000575783 MNX1P50219 401 aaPredicted RBP20.63■□□□□ 0.89
CTDNEP1-211ENST00000575783 SLAIN1Q8ND83 568 aa20.63■□□□□ 0.89
CTDNEP1-211ENST00000575783 PUS3Q9BZE2 481 aaKnown RBP20.63■□□□□ 0.89
CTDNEP1-211ENST00000575783 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
CTDNEP1-211ENST00000575783 F6X3S4 739 aa20.62■□□□□ 0.89
CTDNEP1-211ENST00000575783 CYP2C8P10632 490 aa20.62■□□□□ 0.89
CTDNEP1-211ENST00000575783 ADCY3O60266 1144 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 BEND3Q5T5X7 828 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 APOBEC3HQ6NTF7 200 aaKnown RBP20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 TBC1D22AQ8WUA7 517 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 ZDHHC15Q96MV8 337 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 DEFB118Q96PH6 123 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 PARK7Q99497 189 aaKnown RBP20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 KCNH4Q9UQ05 1017 aa20.61■□□□□ 0.89
CTDNEP1-211ENST00000575783 ELNP15502 786 aa20.6■□□□□ 0.89
CTDNEP1-211ENST00000575783 MOGSQ13724 837 aa20.6■□□□□ 0.89
CTDNEP1-211ENST00000575783 FKBP1CQ5VVH2 108 aa20.6■□□□□ 0.89
CTDNEP1-211ENST00000575783 INHAP05111 366 aa20.59■□□□□ 0.89
CTDNEP1-211ENST00000575783 BCRP11274 1271 aa20.59■□□□□ 0.89
CTDNEP1-211ENST00000575783 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
CTDNEP1-211ENST00000575783 DEFB123Q8N688 67 aa20.59■□□□□ 0.89
CTDNEP1-211ENST00000575783 UNC80Q8N2C7 3258 aa20.59■□□□□ 0.89
CTDNEP1-211ENST00000575783 GRM8O00222 908 aa20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 FLT3LGP49771 235 aa20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 GPAT2Q6NUI2 795 aa20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 PAWRQ96IZ0 340 aaKnown RBP20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 MRIQ9BWK5 157 aa20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
CTDNEP1-211ENST00000575783 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
CTDNEP1-211ENST00000575783 BCAMP50895 628 aa20.57■□□□□ 0.88
CTDNEP1-211ENST00000575783 TCP10Q12799 353 aa20.57■□□□□ 0.88
CTDNEP1-211ENST00000575783 Q7L0L9 218 aa20.57■□□□□ 0.88
CTDNEP1-211ENST00000575783 ZNF112Q9UJU3 913 aa20.57■□□□□ 0.88
CTDNEP1-211ENST00000575783 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
CTDNEP1-211ENST00000575783 FAM151AQ8WW52 585 aa20.56■□□□□ 0.88
CTDNEP1-211ENST00000575783 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
CTDNEP1-211ENST00000575783 HHIPL2Q6UWX4 724 aa20.55■□□□□ 0.88
CTDNEP1-211ENST00000575783 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
CTDNEP1-211ENST00000575783 C7orf61Q8IZ16 206 aa20.55■□□□□ 0.88
CTDNEP1-211ENST00000575783 ZMYND8Q9ULU4 1186 aaPredicted RBP20.55■□□□□ 0.88
CTDNEP1-211ENST00000575783 MAST3O60307 1309 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 CXCL11O14625 94 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 TNPO2O14787 897 aaKnown RBP20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 METTL24Q5JXM2 366 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 PXYLP1Q8TE99 480 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 DIS3LQ8TF46 1054 aaKnown RBP20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 GDF15Q99988 308 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 A0A1B0GUL6 1792 aa20.54■□□□□ 0.88
CTDNEP1-211ENST00000575783 VAMP4O75379 141 aa20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 CAPN2P17655 700 aa20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 BMP8BP34820 402 aa20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 GPR153Q6NV75 609 aa20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 PAK6Q9NQU5 681 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 STXBP5LQ9Y2K9 1186 aa20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 RPAP1Q9BWH6 1393 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-211ENST00000575783 LRRC24Q50LG9 513 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 NOL9Q5SY16 702 aaKnown RBP20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 GADL1Q6ZQY3 521 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 SUCLG2Q96I99 432 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 SUGT1Q9Y2Z0 365 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 ZHX2Q9Y6X8 837 aa20.52■□□□□ 0.88
CTDNEP1-211ENST00000575783 NFIAQ12857 509 aa20.51■□□□□ 0.87
CTDNEP1-211ENST00000575783 IRF5Q13568 498 aa20.51■□□□□ 0.87
CTDNEP1-211ENST00000575783 CCDC27Q2M243 656 aa20.51■□□□□ 0.87
CTDNEP1-211ENST00000575783 CDC42EP5Q6NZY7 148 aa20.51■□□□□ 0.87
CTDNEP1-211ENST00000575783 SLC4A10Q6U841 1118 aa20.51■□□□□ 0.87
CTDNEP1-211ENST00000575783 PDE8BO95263 885 aa20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 SYN1P17600 705 aa20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 SMCR8Q8TEV9 937 aaPredicted RBP20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 KAZALD1Q96I82 304 aa20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 PICK1Q9NRD5 415 aa20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
CTDNEP1-211ENST00000575783 A0A0G2JLL6 359 aaPredicted RBP20.49■□□□□ 0.87
CTDNEP1-211ENST00000575783 PRRT2Q7Z6L0 340 aaPredicted RBP20.49■□□□□ 0.87
CTDNEP1-211ENST00000575783 COA7Q96BR5 231 aa20.49■□□□□ 0.87
CTDNEP1-211ENST00000575783 COL25A1Q9BXS0 654 aaPredicted RBP20.49■□□□□ 0.87
CTDNEP1-211ENST00000575783 MTMR10Q9NXD2 777 aa20.49■□□□□ 0.87
CTDNEP1-211ENST00000575783 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 EXOSC9Q06265 439 aaKnown RBP20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 DIXDC1Q155Q3 683 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 LRIT3Q3SXY7 679 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 ZFPM1Q8IX07 1006 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 SRCIN1Q9C0H9 1055 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 USP40Q9NVE5 1235 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 FAM198AQ9UFP1 575 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms