RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZMYM6O95789 1325 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 SMIM22K7EJ46 135 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 APOA5Q6Q788 366 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 MICU3Q86XE3 530 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 C8orf76Q96K31 380 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 FAM84BQ96KN1 310 aaPredicted RBP27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 TNRC6CQ9HCJ0 1690 aaKnown RBP27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 DHX16O60231 1041 aaKnown RBP27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 CDC27P30260 824 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 SDR42E1Q8WUS8 393 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 LY9Q9HBG7 655 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 PNPLA7Q6ZV29 1317 aa27.68■■■□□ 2.02
NPLOC4-217ENST00000574897 RRP12Q5JTH9 1297 aaKnown RBP27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 METAP2P50579 478 aaKnown RBP eCLIP27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 MAP3K11Q16584 847 aa27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 NLRP3Q96P20 1036 aa27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 TNMDQ9H2S6 317 aa27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 RCOR1Q9UKL0 485 aa27.67■■■□□ 2.02
NPLOC4-217ENST00000574897 RPS8P62241 208 aaKnown RBP27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 TMEM67Q5HYA8 995 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 VPS37DQ86XT2 251 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 CHMP4CQ96CF2 233 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 ZKSCAN3Q9BRR0 538 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 NYXQ9GZU5 481 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 SPATA31A6Q5VVP1 1343 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 AKNAD1Q5T1N1 836 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 ZSCAN30Q86W11 494 aa27.66■■■□□ 2.02
NPLOC4-217ENST00000574897 POLR3DP05423 398 aaPredicted RBP27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 FBXO18Q8NFZ0 1043 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 ZNF384Q8TF68 577 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 PHKBQ93100 1093 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 GJD4Q96KN9 370 aaPredicted RBP27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 TOMM22Q9NS69 142 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 MYH2Q9UKX2 1941 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 CAVIN4Q5BKX8 364 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 NFXL1Q6ZNB6 911 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 TMEM87BQ96K49 555 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 GNL3LQ9NVN8 582 aaKnown RBP27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 TFCP2L1Q9NZI6 479 aa27.65■■■□□ 2.02
NPLOC4-217ENST00000574897 KIF28PB7ZC32 967 aa27.64■■■□□ 2.02
NPLOC4-217ENST00000574897 MEX3CQ5U5Q3 659 aaKnown RBP27.64■■■□□ 2.02
NPLOC4-217ENST00000574897 CLSTN2Q9H4D0 955 aa27.64■■■□□ 2.02
NPLOC4-217ENST00000574897 UVSSAQ2YD98 709 aa27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 MFSD6Q6ZSS7 791 aa27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 MPNDQ8N594 471 aa27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 GOLPH3LQ9H4A5 285 aa27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 DDX19AQ9NUU7 478 aaKnown RBP27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.64■■■□□ 2.01
NPLOC4-217ENST00000574897 UBE2Q2LH0YL09 131 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 IFIT3O14879 490 aaKnown RBP27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 CCDC192P0DO97 292 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 GNAT2P19087 354 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 DYNLL1P63167 89 aaKnown RBP27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 ZNF396Q96N95 335 aaPredicted RBP27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 NACAP1Q9BZK3 213 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 TYRO3Q06418 890 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 TPTE2Q6XPS3 522 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 FAM217BQ9NTX9 383 aaPredicted RBP27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 MRVI1Q9Y6F6 885 aa27.63■■■□□ 2.01
NPLOC4-217ENST00000574897 RGL2O15211 777 aa27.62■■■□□ 2.01
NPLOC4-217ENST00000574897 ZBTB43O43298 467 aa27.62■■■□□ 2.01
NPLOC4-217ENST00000574897 MAGEB6P1A0A0J9YX57 407 aa27.62■■■□□ 2.01
NPLOC4-217ENST00000574897 AP5Z1O43299 807 aa27.62■■■□□ 2.01
NPLOC4-217ENST00000574897 CCAR1Q8IX12 1150 aaKnown RBP27.62■■■□□ 2.01
NPLOC4-217ENST00000574897 AFF2P51816 1311 aa27.61■■■□□ 2.01
NPLOC4-217ENST00000574897 TM4SF1P30408 202 aa27.61■■■□□ 2.01
NPLOC4-217ENST00000574897 STAG1Q8WVM7 1258 aa27.61■■■□□ 2.01
NPLOC4-217ENST00000574897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 MINDY4BA8MYZ0 360 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 FAM196AQ6ZSG2 479 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 TXNRD3Q86VQ6 643 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 SGMS1Q86VZ5 419 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 RIOK1Q9BRS2 568 aaKnown RBP27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 LRRC4BQ9NT99 713 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 JAG2Q9Y219 1238 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 CLIC4Q9Y696 253 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 GOLGA8AA7E2F4 631 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 RANBP6O60518 1105 aaKnown RBP27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 NTRK3Q16288 839 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 FBXO33Q7Z6M2 555 aa27.6■■■□□ 2.01
NPLOC4-217ENST00000574897 ADCY5O95622 1261 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 PPARAQ07869 468 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 HS1BP3Q53T59 392 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 ALG1Q9BT22 464 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 CNNM2Q9H8M5 875 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 CYP2D7A0A087X1C5 515 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 NPHP1O15259 732 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 RFC4P35249 363 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 ME1P48163 572 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 PLCB2Q00722 1185 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 RBM43Q6ZSC3 357 aaKnown RBP27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 KRT23Q9C075 422 aa27.59■■■□□ 2.01
NPLOC4-217ENST00000574897 KIF23Q02241 960 aaPredicted RBP27.58■■■□□ 2.01
NPLOC4-217ENST00000574897 LIFRP42702 1097 aa27.58■■■□□ 2.01
NPLOC4-217ENST00000574897 NOL7Q9UMY1 257 aaKnown RBP27.58■■■□□ 2.01
NPLOC4-217ENST00000574897 SLC12A7Q9Y666 1083 aa27.58■■■□□ 2.01
NPLOC4-217ENST00000574897 MSNP26038 577 aaKnown RBP27.57■■■□□ 2
NPLOC4-217ENST00000574897 ATL3Q6DD88 541 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 PCDHA7Q9UN72 937 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 CCDC69A6NI79 296 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms