RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MAP2K1Q02750 393 aaPredicted RBP25.28■■□□□ 1.64
CHMP6-204ENST00000572778 NOGQ13253 232 aa25.28■■□□□ 1.64
CHMP6-204ENST00000572778 FKBP1CQ5VVH2 108 aa25.28■■□□□ 1.64
CHMP6-204ENST00000572778 PCDHB15Q9Y5E8 787 aa25.28■■□□□ 1.64
CHMP6-204ENST00000572778 GAKO14976 1311 aa25.28■■□□□ 1.64
CHMP6-204ENST00000572778 ECM29Q5VYK3 1845 aa25.28■■□□□ 1.64
CHMP6-204ENST00000572778 GSTO1P78417 241 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 FAM83AQ86UY5 434 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 CDAN1Q8IWY9 1227 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 AIDAQ96BJ3 306 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 NSUN4Q96CB9 384 aaKnown RBP25.27■■□□□ 1.64
CHMP6-204ENST00000572778 FAM163AQ96GL9 167 aaPredicted RBP25.27■■□□□ 1.64
CHMP6-204ENST00000572778 TEPSINQ96N21 525 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 LRRCC1Q9C099 1032 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.27■■□□□ 1.64
CHMP6-204ENST00000572778 MROH7-TTC4A0A0A0MT08 1334 aa25.27■■□□□ 1.64
CHMP6-204ENST00000572778 FAM155AB1AL88 458 aaPredicted RBP25.26■■□□□ 1.63
CHMP6-204ENST00000572778 LDHCP07864 332 aa25.26■■□□□ 1.63
CHMP6-204ENST00000572778 ZNF384Q8TF68 577 aa25.26■■□□□ 1.63
CHMP6-204ENST00000572778 WBP1LQ9NX94 342 aa25.26■■□□□ 1.63
CHMP6-204ENST00000572778 SSC5DA1L4H1 1573 aa25.26■■□□□ 1.63
CHMP6-204ENST00000572778 SLC10A3P09131 477 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 BTDP43251 543 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 TCP10Q12799 353 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 RASAL3Q86YV0 1011 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 ZIC5Q96T25 663 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 DCTPP1Q9H773 170 aa25.25■■□□□ 1.63
CHMP6-204ENST00000572778 SMARCA5O60264 1052 aaPredicted RBP25.24■■□□□ 1.63
CHMP6-204ENST00000572778 IREB2P48200 963 aaKnown RBP25.24■■□□□ 1.63
CHMP6-204ENST00000572778 NFIAQ12857 509 aa25.24■■□□□ 1.63
CHMP6-204ENST00000572778 PIH1D3Q9NQM4 214 aaKnown RBP25.24■■□□□ 1.63
CHMP6-204ENST00000572778 NDUFB9Q9Y6M9 179 aa25.24■■□□□ 1.63
CHMP6-204ENST00000572778 USP2O75604 605 aaPredicted RBP25.23■■□□□ 1.63
CHMP6-204ENST00000572778 MAP3K11Q16584 847 aa25.23■■□□□ 1.63
CHMP6-204ENST00000572778 LDLRAD1Q5T700 205 aa25.23■■□□□ 1.63
CHMP6-204ENST00000572778 NAA16Q6N069 864 aaPredicted RBP25.23■■□□□ 1.63
CHMP6-204ENST00000572778 FAM151AQ8WW52 585 aa25.23■■□□□ 1.63
CHMP6-204ENST00000572778 BEGAINQ9BUH8 593 aa25.23■■□□□ 1.63
CHMP6-204ENST00000572778 SUPT16HQ9Y5B9 1047 aaKnown RBP25.23■■□□□ 1.63
CHMP6-204ENST00000572778 GPR75-ASB3A0A0A6YYF3 556 aa25.22■■□□□ 1.63
CHMP6-204ENST00000572778 KIF23Q02241 960 aaPredicted RBP25.22■■□□□ 1.63
CHMP6-204ENST00000572778 FAM198AQ9UFP1 575 aa25.22■■□□□ 1.63
CHMP6-204ENST00000572778 FOXN1O15353 648 aa25.21■■□□□ 1.63
CHMP6-204ENST00000572778 IDH1O75874 414 aaKnown RBP25.21■■□□□ 1.63
CHMP6-204ENST00000572778 SLC10A4Q96EP9 437 aa25.21■■□□□ 1.63
CHMP6-204ENST00000572778 PCNTO95613 3336 aa25.2■■□□□ 1.63
CHMP6-204ENST00000572778 RGS3P49796 1198 aa25.2■■□□□ 1.62
CHMP6-204ENST00000572778 HOOK2Q96ED9 719 aa25.2■■□□□ 1.62
CHMP6-204ENST00000572778 CLMNQ96JQ2 1002 aa25.2■■□□□ 1.62
CHMP6-204ENST00000572778 NOL10Q9BSC4 688 aaKnown RBP25.2■■□□□ 1.62
CHMP6-204ENST00000572778 ANTXR1Q9H6X2 564 aa25.2■■□□□ 1.62
CHMP6-204ENST00000572778 MKRN3Q13064 507 aaKnown RBP25.19■■□□□ 1.62
CHMP6-204ENST00000572778 DNAJC2Q99543 621 aaKnown RBP25.19■■□□□ 1.62
CHMP6-204ENST00000572778 IDI2Q9BXS1 227 aa25.19■■□□□ 1.62
CHMP6-204ENST00000572778 THSD7BQ9C0I4 1608 aa25.19■■□□□ 1.62
CHMP6-204ENST00000572778 RHBDL3P58872 404 aa25.18■■□□□ 1.62
CHMP6-204ENST00000572778 PICALMQ13492 652 aa25.18■■□□□ 1.62
CHMP6-204ENST00000572778 ZFPM1Q8IX07 1006 aa25.18■■□□□ 1.62
CHMP6-204ENST00000572778 ANKRD13AQ8IZ07 590 aa25.18■■□□□ 1.62
CHMP6-204ENST00000572778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.18■■□□□ 1.62
CHMP6-204ENST00000572778 RPAP1Q9BWH6 1393 aaPredicted RBP25.18■■□□□ 1.62
CHMP6-204ENST00000572778 IGSF3O75054 1194 aa25.17■■□□□ 1.62
CHMP6-204ENST00000572778 ENTPD3O75355 529 aa25.17■■□□□ 1.62
CHMP6-204ENST00000572778 WDHD1O75717 1129 aaPredicted RBP25.17■■□□□ 1.62
CHMP6-204ENST00000572778 BAG3O95817 575 aa25.17■■□□□ 1.62
CHMP6-204ENST00000572778 CYP7A1P22680 504 aa25.17■■□□□ 1.62
CHMP6-204ENST00000572778 CTCFP49711 727 aaPredicted RBP25.17■■□□□ 1.62
CHMP6-204ENST00000572778 MIGA2Q7L4E1 593 aa25.17■■□□□ 1.62
CHMP6-204ENST00000572778 AATFQ9NY61 560 aaKnown RBP eCLIP25.17■■□□□ 1.62
CHMP6-204ENST00000572778 MYH2Q9UKX2 1941 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 UNCXA6NJT0 531 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 MAP3K12Q12852 859 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 TTF1Q15361 905 aaPredicted RBP25.16■■□□□ 1.62
CHMP6-204ENST00000572778 DCAF15Q66K64 600 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 ZSCAN29Q8IWY8 852 aaPredicted RBP25.16■■□□□ 1.62
CHMP6-204ENST00000572778 EXOC6Q8TAG9 804 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 CSRNP1Q96S65 589 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 BOLA2Q9H3K6 86 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 DDX4Q9NQI0 724 aaKnown RBP25.16■■□□□ 1.62
CHMP6-204ENST00000572778 AKAP11Q9UKA4 1901 aa25.16■■□□□ 1.62
CHMP6-204ENST00000572778 GOLIM4O00461 696 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 MAP4K4O95819 1239 aaPredicted RBP25.15■■□□□ 1.62
CHMP6-204ENST00000572778 ATP5JP18859 108 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 MAP3K9P80192 1104 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 AAMPQ13685 434 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 ADGRA1Q86SQ6 560 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 TEX11Q8IYF3 940 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 MAGEB6Q8N7X4 407 aa25.15■■□□□ 1.62
CHMP6-204ENST00000572778 SPRYD7Q5W111 196 aa25.14■■□□□ 1.62
CHMP6-204ENST00000572778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.14■■□□□ 1.62
CHMP6-204ENST00000572778 SH3RF3Q8TEJ3 882 aaPredicted RBP25.14■■□□□ 1.62
CHMP6-204ENST00000572778 ELP3Q9H9T3 547 aa25.14■■□□□ 1.62
CHMP6-204ENST00000572778 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.13■■□□□ 1.61
CHMP6-204ENST00000572778 EDC3Q96F86 508 aaKnown RBP25.13■■□□□ 1.61
CHMP6-204ENST00000572778 WRNIP1Q96S55 665 aa25.13■■□□□ 1.61
CHMP6-204ENST00000572778 ZNF341Q9BYN7 854 aa25.13■■□□□ 1.61
CHMP6-204ENST00000572778 TSKSQ9UJT2 592 aa25.13■■□□□ 1.61
CHMP6-204ENST00000572778 CSADQ9Y600 493 aa25.13■■□□□ 1.61
CHMP6-204ENST00000572778 RFX7Q2KHR2 1363 aa25.13■■□□□ 1.61
CHMP6-204ENST00000572778 PLCG2P16885 1265 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms