RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
TRIM25-204ENST00000570749 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM25-204ENST00000570749 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
TRIM25-204ENST00000570749 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
TRIM25-204ENST00000570749 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
TRIM25-204ENST00000570749 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
TRIM25-204ENST00000570749 ZNF341Q9BYN7 854 aa11.97□□□□□ -0.49
TRIM25-204ENST00000570749 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
TRIM25-204ENST00000570749 DAGLAQ9Y4D2 1042 aa11.97□□□□□ -0.49
TRIM25-204ENST00000570749 GAKO14976 1311 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 PRDX5P30044 214 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 GSTO1P78417 241 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 VGLL4Q14135 290 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 FBXO46Q6PJ61 603 aaPredicted RBP11.96□□□□□ -0.49
TRIM25-204ENST00000570749 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.96□□□□□ -0.49
TRIM25-204ENST00000570749 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
TRIM25-204ENST00000570749 ENTPD3O75355 529 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 LDHCP07864 332 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
TRIM25-204ENST00000570749 TFCP2Q12800 502 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 RASGRF1Q13972 1273 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 IDI2Q9BXS1 227 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 FZD1Q9UP38 647 aa11.95□□□□□ -0.5
TRIM25-204ENST00000570749 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 CETPP11597 493 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 TIMM10P62072 90 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 PPATQ06203 517 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 PPIL2Q13356 520 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 CDC42EP5Q6NZY7 148 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 SSH3Q8TE77 659 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 ABCF2Q9UG63 623 aa11.94□□□□□ -0.5
TRIM25-204ENST00000570749 COL2A1P02458 1487 aaPredicted RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
TRIM25-204ENST00000570749 RFX7Q2KHR2 1363 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
TRIM25-204ENST00000570749 CCL15-CCL14A0A0B4J2E2 113 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 ADORA1P30542 326 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 GJA5P36382 358 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 CACNB3P54284 484 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 POLA2Q14181 598 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 CCL15Q16663 113 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 CCDC158Q5M9N0 1113 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 NOL9Q5SY16 702 aaKnown RBP11.93□□□□□ -0.5
TRIM25-204ENST00000570749 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 SPATA5Q8NB90 893 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 NEUROD6Q96NK8 337 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 ZFYVE28Q9HCC9 887 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 ZNF112Q9UJU3 913 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 SNCAIPQ9Y6H5 919 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
TRIM25-204ENST00000570749 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 CRHR2Q13324 411 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
TRIM25-204ENST00000570749 ERC1Q8IUD2 1116 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 ZNF512BQ96KM6 892 aaPredicted RBP11.92□□□□□ -0.5
TRIM25-204ENST00000570749 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
TRIM25-204ENST00000570749 FOCADQ5VW36 1801 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 HTTP42858 3142 aa11.92□□□□□ -0.5
TRIM25-204ENST00000570749 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
TRIM25-204ENST00000570749 GNRH1P01148 92 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 PLCG2P16885 1265 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 SP3Q02447 781 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 TAF1CQ15572 869 aaPredicted RBP11.91□□□□□ -0.5
TRIM25-204ENST00000570749 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 CERS3Q8IU89 383 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 NOL10Q9BSC4 688 aaKnown RBP11.91□□□□□ -0.5
TRIM25-204ENST00000570749 HMG20BQ9P0W2 317 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
TRIM25-204ENST00000570749 PTPRFP10586 1907 aa11.9□□□□□ -0.5
TRIM25-204ENST00000570749 SURF6O75683 361 aaKnown RBP11.9□□□□□ -0.5
TRIM25-204ENST00000570749 BTDP43251 543 aa11.9□□□□□ -0.5
TRIM25-204ENST00000570749 RGS3P49796 1198 aa11.9□□□□□ -0.5
TRIM25-204ENST00000570749 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
TRIM25-204ENST00000570749 MECOMQ03112 1051 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms