RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 XAGE2Q96GT9 111 aa18.67■□□□□ 0.58
RAB40B-203ENST00000570676 TMOD2Q9NZR1 351 aa18.67■□□□□ 0.58
RAB40B-203ENST00000570676 RFX7Q2KHR2 1363 aa18.67■□□□□ 0.58
RAB40B-203ENST00000570676 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
RAB40B-203ENST00000570676 TBC1D8O95759 1140 aa18.66■□□□□ 0.58
RAB40B-203ENST00000570676 LDHBP07195 334 aaKnown RBP18.66■□□□□ 0.58
RAB40B-203ENST00000570676 POLA2Q14181 598 aa18.66■□□□□ 0.58
RAB40B-203ENST00000570676 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.66■□□□□ 0.58
RAB40B-203ENST00000570676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.66■□□□□ 0.58
RAB40B-203ENST00000570676 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
RAB40B-203ENST00000570676 AKAP2Q9Y2D5 859 aa18.66■□□□□ 0.58
RAB40B-203ENST00000570676 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
RAB40B-203ENST00000570676 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
RAB40B-203ENST00000570676 ELP3Q9H9T3 547 aa18.65■□□□□ 0.58
RAB40B-203ENST00000570676 VGLL4Q14135 290 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 CDC42EP5Q6NZY7 148 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 IFNL1Q8IU54 200 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
RAB40B-203ENST00000570676 R3HDMLQ9H3Y0 253 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 GAKO14976 1311 aa18.64■□□□□ 0.57
RAB40B-203ENST00000570676 MYO5AQ9Y4I1 1855 aaKnown RBP18.63■□□□□ 0.57
RAB40B-203ENST00000570676 GPR25O00155 361 aa18.63■□□□□ 0.57
RAB40B-203ENST00000570676 NFIAQ12857 509 aa18.63■□□□□ 0.57
RAB40B-203ENST00000570676 ZGPATQ8N5A5 531 aaKnown RBP18.63■□□□□ 0.57
RAB40B-203ENST00000570676 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
RAB40B-203ENST00000570676 OPTNQ96CV9 577 aa18.63■□□□□ 0.57
RAB40B-203ENST00000570676 ALDH1A1P00352 501 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 INHBEP58166 350 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 MAP3K9P80192 1104 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
RAB40B-203ENST00000570676 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 CDK5RAP2Q96SN8 1893 aa18.62■□□□□ 0.57
RAB40B-203ENST00000570676 ATRNL1Q5VV63 1379 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 TESPA1A2RU30 521 aaPredicted RBP18.61■□□□□ 0.57
RAB40B-203ENST00000570676 CCDC85CA6NKD9 419 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 ZBTB7BO15156 539 aaPredicted RBP18.61■□□□□ 0.57
RAB40B-203ENST00000570676 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
RAB40B-203ENST00000570676 ATP8B2P98198 1209 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
RAB40B-203ENST00000570676 PI16Q6UXB8 463 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 FAM198AQ9UFP1 575 aa18.61■□□□□ 0.57
RAB40B-203ENST00000570676 ZNF384Q8TF68 577 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 MS4A4AQ96JQ5 239 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 PTPN18Q99952 460 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 CHMP4BQ9H444 224 aaKnown RBP18.6■□□□□ 0.57
RAB40B-203ENST00000570676 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 CSADQ9Y600 493 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 DOCK1Q14185 1865 aa18.6■□□□□ 0.57
RAB40B-203ENST00000570676 MROH7-TTC4A0A0A0MT08 1334 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 FOCADQ5VW36 1801 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 SPDYE5A6NIY4 337 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 MCAMP43121 646 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 TCP10Q12799 353 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 DCAF15Q66K64 600 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 DZIP1Q86YF9 867 aaKnown RBP18.59■□□□□ 0.57
RAB40B-203ENST00000570676 HOOK2Q96ED9 719 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 USP40Q9NVE5 1235 aa18.59■□□□□ 0.57
RAB40B-203ENST00000570676 TNNI3KQ59H18 835 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 SPATA5Q8NB90 893 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 BRI3BPQ8WY22 251 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 ZKSCAN4Q969J2 545 aaPredicted RBP18.58■□□□□ 0.56
RAB40B-203ENST00000570676 OTUD5Q96G74 571 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 IDI2Q9BXS1 227 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.56
RAB40B-203ENST00000570676 FPGT-TNNI3KV9GXZ4 949 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.56
RAB40B-203ENST00000570676 PTPRFP10586 1907 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 FKTNO75072 461 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 MECOMQ03112 1051 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 SPTY2D1Q68D10 685 aaPredicted RBP18.57■□□□□ 0.56
RAB40B-203ENST00000570676 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 ZFPM1Q8IX07 1006 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 FAM163AQ96GL9 167 aaPredicted RBP18.57■□□□□ 0.56
RAB40B-203ENST00000570676 ZNF341Q9BYN7 854 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 SIPA1L1O43166 1804 aa18.57■□□□□ 0.56
RAB40B-203ENST00000570676 ZSWIM8A7E2V4 1837 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
RAB40B-203ENST00000570676 INPP5BP32019 993 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 BTDP43251 543 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 RGS3P49796 1198 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 CRHR2Q13324 411 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 GORABQ5T7V8 394 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 MIGA2Q7L4E1 593 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 ZBTB40Q9NUA8 1239 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 ATAD5Q96QE3 1844 aa18.56■□□□□ 0.56
RAB40B-203ENST00000570676 CCL15-CCL14A0A0B4J2E2 113 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 ENTPD3O75355 529 aa18.55■□□□□ 0.56
RAB40B-203ENST00000570676 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms