RNA–Protein interactions for RNA: ENST00000570098.2

CHRFAM7A-207, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5

Gene CHRFAM7A, Length 316 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-207ENST00000570098 HDLBPQ00341 1268 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SREBF2Q12772 1141 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PUM3Q15397 648 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 DIXDC1Q155Q3 683 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ATP2B3Q16720 1220 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CAVIN4Q5BKX8 364 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 INTS3Q68E01 1043 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CTU1Q7Z7A3 348 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 VPS37DQ86XT2 251 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 IFNL1Q8IU54 200 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 REM2Q8IYK8 340 aaPredicted RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MIER1Q8N108 512 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TBC1D22AQ8WUA7 517 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZNF296Q8WUU4 475 aaPredicted RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 LPIN2Q92539 896 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TEKT1Q969V4 418 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SLC10A4Q96EP9 437 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZDHHC15Q96MV8 337 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CFHR5Q9BXR6 569 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 API5Q9BZZ5 524 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TMEM39BQ9GZU3 492 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ELP3Q9H9T3 547 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 COPRSQ9NQ92 184 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 DAGLAQ9Y4D2 1042 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 LAMA2P24043 3122 aaKnown RBP2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TANC1Q9C0D5 1861 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SIP14410 1827 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 KIAA1671Q9BY89 1806 aa2.75□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ATRNL1Q5VV63 1379 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TRIP11Q15643 1979 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MAST3O60307 1309 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SALL1Q9NSC2 1324 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 COL2A1P02458 1487 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PNMA6EA0A0J9YXQ4 647 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 A0A1B0GUL7 405 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TESPA1A2RU30 521 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MANSC4A6NHS7 340 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SRGAP3O43295 1099 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 FKTNO75072 461 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 LDHBP07195 334 aaKnown RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 GNAI3P08754 354 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SLURP2P0DP57 97 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZBTB48P10074 688 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 RLBP1P12271 317 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PRDX5P30044 214 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 INPP5BP32019 993 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 IL15P40933 162 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TNNI2P48788 182 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TIMM10P62072 90 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MAP3K9P80192 1104 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 HNRNPUQ00839 825 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TCP10Q12799 353 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TFCP2Q12800 502 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 NFIAQ12857 509 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CRHR2Q13324 411 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MTX1Q13505 466 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TNFAIP1Q13829 316 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 VGLL4Q14135 290 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SUPT20HL1Q3ZLR7 823 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 NOM1Q5C9Z4 860 aaKnown RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 FKBP1CQ5VVH2 108 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 APOBEC3HQ6NTF7 200 aaKnown RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CDC42EP5Q6NZY7 148 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 HHIPL2Q6UWX4 724 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PI16Q6UXB8 463 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ATF7IPQ6VMQ6 1270 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 FAM83AQ86UY5 434 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZFPM1Q8IX07 1006 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ANKRD13AQ8IZ07 590 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 TMEM57Q8N5G2 664 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 WDR66Q8TBY9 1149 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CD99L2Q8TCZ2 262 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZNF384Q8TF68 577 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 BRI3BPQ8WY22 251 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ARHGAP45Q92619 1136 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ZKSCAN4Q969J2 545 aaPredicted RBP2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CLUAP1Q96AJ1 413 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 OPTNQ96CV9 577 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 OTUD5Q96G74 571 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 XAGE2Q96GT9 111 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MS4A4AQ96JQ5 239 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PTPN18Q99952 460 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 C1orf115Q9H7X2 142 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 CEP126Q9P2H0 1117 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 FAM198AQ9UFP1 575 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 FBXO3Q9UK99 471 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 DENND2AQ9ULE3 1009 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 HPS5Q9UPZ3 1129 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SUGT1Q9Y2Z0 365 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 SNCAIPQ9Y6H5 919 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 NCOR1O75376 2440 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MYH11P35749 1972 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 BRWD1Q9NSI6 2320 aa2.74□□□□□ -1.97
CHRFAM7A-207ENST00000570098 REV3LO60673 3130 aa2.73□□□□□ -1.97
CHRFAM7A-207ENST00000570098 MROH7-TTC4A0A0A0MT08 1334 aa2.73□□□□□ -1.97
CHRFAM7A-207ENST00000570098 GAKO14976 1311 aa2.73□□□□□ -1.97
CHRFAM7A-207ENST00000570098 PDS5AQ29RF7 1337 aaKnown RBP2.73□□□□□ -1.97
CHRFAM7A-207ENST00000570098 ADGRA2Q96PE1 1338 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms