RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 KCNMB2Q9Y691 235 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CDC42BPGQ6DT37 1551 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 MYOM2P54296 1465 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 ATRNO75882 1429 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 NAIPQ13075 1403 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 SENP3-EIF4A1A0A087X0R7 540 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 LOC102724159A0A0B4J2E5 919 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 EREGO14944 169 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 GREM1O60565 184 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 ADAMTS2O95450 1211 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 PWP2Q15269 919 aaKnown RBP4.32□□□□□ -1.72
CNOT1-221ENST00000569924 TRIP4Q15650 581 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-221ENST00000569924 HSP90AB2PQ58FF8 381 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 KIAA0319Q5VV43 1072 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 NBPF10Q6P3W6 841 aaKnown RBP4.32□□□□□ -1.72
CNOT1-221ENST00000569924 FBXL19Q6PCT2 694 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 ZNF280CQ8ND82 737 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 GLIS3Q8NEA6 775 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 TRPM4Q8TD43 1214 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 SH3TC2Q8TF17 1288 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 APPBP2Q92624 585 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 ORAI2Q96SN7 254 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 CHRDQ9H2X0 955 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 ZDHHC3Q9NYG2 299 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 TMEM63CQ9P1W3 806 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 USP21Q9UK80 565 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 PPM1HQ9ULR3 514 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 TRAK1Q9UPV9 953 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 USP20Q9Y2K6 914 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 FAN1Q9Y2M0 1017 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 MSRB2Q9Y3D2 182 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 SUPT16HQ9Y5B9 1047 aaKnown RBP4.32□□□□□ -1.72
CNOT1-221ENST00000569924 PPLO60437 1756 aa4.32□□□□□ -1.72
CNOT1-221ENST00000569924 PXDNQ92626 1479 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 RRBP1Q9P2E9 1410 aaKnown RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 TPD52L2O43399 206 aaKnown RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 GYS2P54840 703 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 AMPD3Q01432 767 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 NBPF1Q3BBV0 1214 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 TNNI3KQ59H18 835 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 GNASQ5JWF2 1037 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 PCNX4Q63HM2 1172 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 Q6ZVU0 165 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 SV2BQ7L1I2 683 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 KIAA0907Q7Z7F0 614 aaPredicted RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 HOMER1Q86YM7 354 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 LILRB2Q8N423 598 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 C1orf127Q8N9H9 656 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 PHC3Q8NDX5 983 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 STAG1Q8WVM7 1258 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 ANAPC16Q96DE5 110 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 RHOVQ96L33 236 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 PSMD1Q99460 953 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 DNAJC7Q99615 494 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 TRIM56Q9BRZ2 755 aaKnown RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 SRRTQ9BXP5 876 aaKnown RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 GRIP2Q9C0E4 1043 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 MYH16Q9H6N6 1097 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 KANSL2Q9H9L4 492 aa4.31□□□□□ -1.72
CNOT1-221ENST00000569924 MARF1Q9Y4F3 1742 aaKnown RBP4.31□□□□□ -1.72
CNOT1-221ENST00000569924 BCL9LQ86UU0 1499 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 TECPR2O15040 1411 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 LRPPRCP42704 1394 aaKnown RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 ESYT3A0FGR9 886 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 CCDC85CA6NKD9 419 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 F6X3S4 739 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 SMAD7O15105 426 aaKnown RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 S100BP04271 92 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 GARTP22102 1010 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 GPC1P35052 558 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 PLA2G4AP47712 749 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 PTPN5P54829 565 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 CTC1Q2NKJ3 1217 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 TAF7LQ5H9L4 462 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 BTLAQ7Z6A9 289 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 SLITRK4Q8IW52 837 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 AIDAQ96BJ3 306 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 SHDQ96IW2 340 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 EHD4Q9H223 541 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 TYW1Q9NV66 732 aaKnown RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 ABI2Q9NYB9 513 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 UBP1Q9NZI7 540 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 CNTN3Q9P232 1028 aa4.3□□□□□ -1.72
CNOT1-221ENST00000569924 MAGEC2Q9UBF1 373 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-221ENST00000569924 ABCC11Q96J66 1382 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 ANKRD30BQ9BXX2 1392 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 A0A1W2PP55 124 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 WNT7AO00755 349 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-221ENST00000569924 PF4P02776 101 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 PDGFRBP09619 1106 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 GGCXP38435 758 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 MASP1P48740 699 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 VEGFBP49765 207 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 FCGRTP55899 365 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 LMNB2Q03252 620 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 APOBRQ0VD83 1088 aa4.29□□□□□ -1.72
CNOT1-221ENST00000569924 IFRD2Q12894 506 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms