RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MMP14P50281 582 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 SNW1Q13573 536 aaKnown RBP10.18□□□□□ -0.78
LINC00558-201ENST00000569422 FBXO18Q8NFZ0 1043 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
LINC00558-201ENST00000569422 MINDY4BA8MYZ0 360 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 MAP3K12Q12852 859 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 CCDC87Q9NVE4 849 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 BCL9O00512 1426 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 LOC102724428A0A0B4J2F2 783 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 IGHMBP2P38935 993 aaKnown RBP10.18□□□□□ -0.78
LINC00558-201ENST00000569422 ZNF75DP51815 510 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 SIK1P57059 783 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 FAM160A1Q05DH4 1040 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 ARID5BQ14865 1188 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 ZNF34Q8IZ26 560 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 AOPEPQ8N6M6 819 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 NUP133Q8WUM0 1156 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 MRPS27Q92552 414 aaKnown RBP10.18□□□□□ -0.78
LINC00558-201ENST00000569422 STRBPQ96SI9 672 aaKnown RBP10.18□□□□□ -0.78
LINC00558-201ENST00000569422 SLC26A6Q9BXS9 759 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 SLC4A4Q9Y6R1 1079 aa10.18□□□□□ -0.78
LINC00558-201ENST00000569422 GOLGA8AA7E2F4 631 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 SMIM22K7EJ46 135 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 SPTLC2O15270 562 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 ITPK1Q13572 414 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 MYSM1Q5VVJ2 828 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 INTS5Q6P9B9 1019 aaKnown RBP10.17□□□□□ -0.78
LINC00558-201ENST00000569422 IFNL3Q8IZI9 196 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 ZBTB43O43298 467 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 UQCRFS1P1P0C7P4 283 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 GYG1P46976 350 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00558-201ENST00000569422 EPB41L4AQ9HCS5 686 aaPredicted RBP10.17□□□□□ -0.78
LINC00558-201ENST00000569422 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 JAG2Q9Y219 1238 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 PARP4Q9UKK3 1724 aaKnown RBP10.17□□□□□ -0.78
LINC00558-201ENST00000569422 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
LINC00558-201ENST00000569422 CCDC69A6NI79 296 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 RRP9O43818 475 aaKnown RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 UBE3CQ15386 1083 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 STX1AQ16623 288 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 PLCD3Q8N3E9 789 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 C16orf45Q96MC5 204 aaPredicted RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 ABCC6O95255 1503 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 IARSP41252 1262 aaKnown RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 EIF5P55010 431 aaKnown RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 CCDC144BQ3MJ40 725 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 KRT40Q6A162 431 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 CPLX2Q6PUV4 134 aaKnown RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 MARCH10Q8NA82 808 aaPredicted RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 KIAA1524Q8TCG1 905 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 ERVV-1B6SEH8 477 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
LINC00558-201ENST00000569422 CHRNDQ07001 517 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 CCDC152Q4G0S7 254 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 FAM182BQ5T319 152 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 VPS37DQ86XT2 251 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 ENGASEQ8NFI3 743 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 CLIC6Q96NY7 704 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 RTEL1Q9NZ71 1219 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 MROH5Q6ZUA9 1318 aa10.16□□□□□ -0.78
LINC00558-201ENST00000569422 TJP1Q07157 1748 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 LAMB4A4D0S4 1761 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 hCG_1642624A0A1W2PR95 340 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 CYP7A1P22680 504 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 TRIM29Q14134 588 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 ANO1Q5XXA6 986 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 ADALQ6DHV7 355 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 RBM43Q6ZSC3 357 aaKnown RBP10.15□□□□□ -0.78
LINC00558-201ENST00000569422 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 TDRD7Q8NHU6 1098 aaKnown RBP10.15□□□□□ -0.78
LINC00558-201ENST00000569422 KCNJ14Q9UNX9 436 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 TCRBV5S4A2TA0A5A2 114 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 PRDM1O75626 825 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 ARID4AP29374 1257 aaPredicted RBP10.15□□□□□ -0.78
LINC00558-201ENST00000569422 IQCB1Q15051 598 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 DPCR1Q3MIW9 517 aa10.15□□□□□ -0.78
LINC00558-201ENST00000569422 FMR1NBQ8N0W7 255 aaPredicted RBP10.15□□□□□ -0.78
LINC00558-201ENST00000569422 CYP2D7A0A087X1C5 515 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 WDHD1O75717 1129 aaPredicted RBP10.14□□□□□ -0.79
LINC00558-201ENST00000569422 ZNF202O95125 648 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 FGFR2P21802 821 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 GUCY1A2P33402 732 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 CACTINQ8WUQ7 758 aaKnown RBP10.14□□□□□ -0.79
LINC00558-201ENST00000569422 ANO10Q9NW15 660 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 GSG1L2A8MUP6 293 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 CTAGE5O15320 804 aa10.14□□□□□ -0.79
LINC00558-201ENST00000569422 EVCP57679 992 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms